Integrative Orthology Viewer: PT08G08210 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G08210 | 1 | |
Anchor point | PT10G17390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT08G08210 PT10G17390 | 2 | ||
Tree-based ortholog | PT10G17390 PT08G08210 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT3G12740 AT1G16360 AT1G54320 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G54320 AT3G12740 | 2 | ||
Tree-based ortholog | many-to-many | AT1G79450 AT1G16360 AT1G54320 ... | 4 | ||
Brachypodium distachyon | Anchor point | 1-to-many | BD3G05450 BD1G31850 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G31850 | 1 | ||
Tree-based ortholog | many-to-many | BD3G05450 BD1G31850 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00032G00760 | 1 | |
Tree-based ortholog | many-to-1 | CP00032G00760 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G08620 | 1 | |
Tree-based ortholog | many-to-many | CR07G10400 CR06G08620 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV2550052G00010 | 1 | |
Tree-based ortholog | many-to-many | HV53240G00010 HV2550052G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G20800 MA11G26410 | 2 | |
Tree-based ortholog | many-to-many | MA11G26410 MA06G20800 | 2 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_02G07490 OSINDICA_06G41400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G41400 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G07490 OSINDICA_06G41400 | 2 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS02G07750 OS06G45430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G45430 | 1 | ||
Tree-based ortholog | many-to-many | OS02G07750 OS06G45430 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G05560 | 1 | |
Tree-based ortholog | many-to-1 | OL01G05560 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00084G00610 PP00028G00850 | 2 | |
Tree-based ortholog | many-to-many | PP00104G00040 PP00136G00500 PP00206G00580 | 3 | ||
Setaria italica | Anchor point | 1-to-many | SI004G18930 SI001G07260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G18930 | 1 | ||
Tree-based ortholog | many-to-many | SI004G18930 SI001G07260 | 2 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G054800 | 1 | |
Tree-based ortholog | many-to-1 | SL05G054800 | 1 | ||
Sorghum bicolor | Anchor point | 1-to-many | SB04G004910 SB10G026560 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G026560 | 1 | ||
Tree-based ortholog | many-to-many | SB10G026560 SB04G004910 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV19G09570 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV19G09570 | 1 | ||
Tree-based ortholog | many-to-1 | VV19G09570 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM05G20550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G20550 | 1 | ||
Tree-based ortholog | many-to-many | ZM09G16880 ZM06G12090 ZM07G19970 ... | 5 |