Integrative Orthology Viewer: PT08G06800 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT08G06800 | 1 | |
Anchor point | PT16G11580 PT10G18930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT10G18930 PT08G06800 | 2 | ||
Tree-based ortholog | PT08G06800 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G11210 | 1 | |
Anchor point | many-to-many | AT2G38180 AT3G11210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G11210 | 1 | ||
Tree-based ortholog | 1-to-1 | AT3G11210 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G74310 | 1 | |
Tree-based ortholog | 1-to-1 | BD1G23070 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00019G01750 | 1 | |
Anchor point | many-to-many | CP00019G01750 CP00007G00390 CP00011G01340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00019G01750 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00019G01750 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR09G02010 CR09G02020 | 2 | |
Tree-based ortholog | 1-to-1 | CR09G02010 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1569047G00010 | 1 | |
Tree-based ortholog | 1-to-1 | HV7515G00010 | 1 | ||
Musa acuminata | Orthologous gene family | 1-to-1 | MA05G08880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA05G08880 | 1 | ||
Tree-based ortholog | 1-to-1 | MA05G08880 | 1 | ||
Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_00G30710 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_00G30710 | 1 | ||
Tree-based ortholog | 1-to-1 | OSINDICA_00G30710 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G48070 | 1 | |
Tree-based ortholog | 1-to-many | OS09G03490 OS06G06230 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL05G00150 | 1 | |
Tree-based ortholog | 1-to-1 | OL05G00150 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00220G00070 | 1 | |
Tree-based ortholog | 1-to-1 | PP00220G00070 | 1 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI008G25570 | 1 | |
Tree-based ortholog | 1-to-many | SI005G15100 SI005G16940 | 2 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL06G051720 SL10G076740 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G051720 | 1 | ||
Tree-based ortholog | 1-to-1 | SL10G076740 | 1 | ||
Sorghum bicolor | Orthologous gene family | 1-to-1 | SB02G020850 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G020850 | 1 | ||
Tree-based ortholog | 1-to-1 | SB02G020850 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G10550 | 1 | |
Anchor point | many-to-many | VV08G12920 VV13G10550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G10550 | 1 | ||
Tree-based ortholog | 1-to-1 | VV13G10550 | 1 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM10G26620 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G26620 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM10G26620 | 1 |