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Integrative Orthology Viewer:
PT08G04390
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT08G04390 PT10G21770 | 2 |  |
| Anchor point | PT10G21770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT08G04390 PT10G21770 | 2 | ||
| Tree-based ortholog | PT08G04390 PT10G21770 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G28500 AT1G07900 | 2 | |
| Tree-based ortholog | many-to-many | AT2G28500 AT1G07900 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G65760 BD2G37960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G65760 | 1 | ||
| Tree-based ortholog | many-to-many | BD1G65760 BD2G37960 | 2 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00053G00260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00053G00260 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00053G00260 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV54974G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV54974G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA07G15910 | 1 | |
| Anchor point | 1-to-1 | MA06G16050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA08G10050 MA07G15910 MA10G23460 | 3 | ||
| Tree-based ortholog | many-to-many | MA03G18200 MA08G10050 MA10G23460 | 3 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_03G16430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSINDICA_03G16430 OSINDICA_00G03580 | 2 | ||
| Tree-based ortholog | many-to-many | OSINDICA_03G16430 OSINDICA_00G03580 OSINDICA_05G02070 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS03G17810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G17810 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G17810 OS05G03160 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00238G00210 PP00192G00320 PP00066G00300 | 3 | |
| Tree-based ortholog | many-to-many | PP00238G00210 PP00066G00300 PP00192G00320 ... | 24 | ||
| Setaria italica | Anchor point | 1-to-1 | SI009G45630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G04550 | 1 | ||
| Tree-based ortholog | many-to-many | SI009G45630 SI003G04550 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G048740 | 1 | |
| Anchor point | 1-to-many | SL11G072470 SL04G050010 SL06G075330 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G048740 | 1 | ||
| Tree-based ortholog | many-to-1 | SL06G075330 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-many | SB09G002190 SB01G038650 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G038650 | 1 | ||
| Tree-based ortholog | many-to-many | SB01G038650 SB09G002190 | 2 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV06G04890 | 1 | |
| Anchor point | 1-to-many | VV06G04890 VV13G03660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV06G04890 VV06G04870 | 2 | ||
| Tree-based ortholog | many-to-1 | VV13G03660 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM01G12080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G12080 | 1 | ||
| Tree-based ortholog | many-to-many | ZM01G12080 ZM09G23280 ZM08G20940 ... | 4 |