Integrative Orthology Viewer: PT07G13780 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT07G13780 | 1 | |
Anchor point | PT17G01380 PT00G00270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT00G00280 PT07G13790 PT07G13800 ... | 5 | ||
Tree-based ortholog | PT00G00270 PT00G00280 PT07G13800 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-many | AT4G28410 AT2G20610 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G53970 | 1 | ||
Tree-based ortholog | many-to-many | AT5G36160 AT5G53970 | 2 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD4G16430 BD4G16440 | 2 | |
Tree-based ortholog | many-to-many | BD3G11430 BD1G41740 BD4G16430 ... | 4 | ||
Carica papaya | Anchor point | many-to-1 | CP00083G00800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00083G00800 | 1 | ||
Tree-based ortholog | many-to-many | CP00131G00870 CP00083G00800 | 2 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-many | CR01G07410 CR06G08070 CR01G10300 | 3 | |
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV70900G00010 | 1 | |
Tree-based ortholog | many-to-many | HV275979G00010 HV39910G00010 HV135047G00010 ... | 5 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA09G29780 | 1 | |
Tree-based ortholog | many-to-many | MA09G29780 MA03G03270 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G18850 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_02G18850 OSINDICA_02G18820 OSINDICA_02G19150 ... | 5 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G19970 | 1 | |
Tree-based ortholog | many-to-many | OS02G19970 OS02G19924 OS02G20360 ... | 5 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G04610 | 1 | |
Tree-based ortholog | many-to-many | OL01G04610 OL06G02530 OL11G01770 ... | 4 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00121G00630 | 1 | |
Tree-based ortholog | many-to-many | PP00121G00630 PP00014G01840 PP00135G00610 ... | 5 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI004G15710 SI004G16110 | 2 | |
Tree-based ortholog | many-to-many | SI001G14190 SI001G14220 SI001G14340 ... | 7 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL07G053710 SL10G008200 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G053720 | 1 | ||
Tree-based ortholog | many-to-many | SL12G096240 SL12G088000 SL10G007110 ... | 4 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB08G000600 | 1 | |
Tree-based ortholog | many-to-many | SB08G000600 SB03G026220 SB02G003520 ... | 6 | ||
Vitis vinifera | Anchor point | many-to-1 | VV12G01940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV12G01900 VV12G01940 | 2 | ||
Tree-based ortholog | many-to-many | VV12G01900 VV12G01930 VV12G01870 | 3 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G27920 ZM04G35520 | 2 | |
Tree-based ortholog | many-to-many | ZM05G27920 ZM04G35520 ZM02G43340 ... | 4 |