Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT07G13730
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT07G13730 | 1 |  |
| Anchor point | PT17G01470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT17G01470 PT07G13730 | 2 | ||
| Tree-based ortholog | PT07G13730 PT17G01470 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-1 | AT4G28450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G28450 | 1 | ||
| Tree-based ortholog | many-to-1 | AT4G28450 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G21640 | 1 | |
| Tree-based ortholog | many-to-many | BD5G21640 BD2G08280 | 2 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00083G00880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00083G00880 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00083G00880 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G01450 | 1 | |
| Tree-based ortholog | many-to-1 | CR07G01450 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV50813G00020 | 1 | |
| Tree-based ortholog | many-to-1 | HV50813G00020 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA08G16490 | 1 | |
| Tree-based ortholog | many-to-1 | MA08G16490 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G13090 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_01G13020 OSINDICA_01G13090 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G13730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G13730 | 1 | ||
| Tree-based ortholog | many-to-1 | OS01G13730 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G02060 | 1 | |
| Tree-based ortholog | many-to-1 | OL12G02060 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00370G00070 | 1 | |
| Tree-based ortholog | many-to-1 | PP00370G00070 | 1 | ||
| Setaria italica | Anchor point | 1-to-1 | SI005G00330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G00330 | 1 | ||
| Tree-based ortholog | many-to-1 | SI005G00330 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL07G053660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G053660 | 1 | ||
| Tree-based ortholog | many-to-1 | SL07G053660 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB03G000410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G000410 | 1 | ||
| Tree-based ortholog | many-to-many | SB01G000780 SB03G000410 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV12G02000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G02000 | 1 | ||
| Tree-based ortholog | many-to-1 | VV12G02000 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G59890 | 1 | |
| Tree-based ortholog | many-to-1 | ZM01G59890 | 1 |