Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT07G13290
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT07G13290 | 1 |  |
| Anchor point | PT17G02280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT07G13290 PT17G02320 | 2 | ||
| Tree-based ortholog | PT17G02280 PT17G02320 PT07G13290 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT2G43490 AT3G59570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT3G59570 AT2G43490 | 2 | ||
| Tree-based ortholog | many-to-many | AT2G43490 AT3G59570 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G74660 | 1 | |
| Tree-based ortholog | many-to-1 | BD1G74660 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01040G00020 | 1 | |
| Tree-based ortholog | many-to-1 | CP01040G00020 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G04280 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G12050 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV2550542G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV2550542G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G08360 MA06G29450 | 2 | |
| Tree-based ortholog | many-to-many | MA09G08360 MA06G29450 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G00040 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_01G00040 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G01010 | 1 | |
| Tree-based ortholog | many-to-1 | OS01G01010 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G01400 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00346G00050 | 1 | |
| Tree-based ortholog | many-to-1 | PP00346G00050 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G06670 | 1 | |
| Tree-based ortholog | many-to-1 | SI005G06670 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL03G058470 | 1 | |
| Tree-based ortholog | many-to-1 | SL03G058470 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G009250 | 1 | |
| Tree-based ortholog | many-to-1 | SB03G009250 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G08880 | 1 | |
| Tree-based ortholog | many-to-1 | VV00G08770 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G07960 | 1 | |
| Tree-based ortholog | many-to-1 | ZM03G07960 | 1 |