Integrative Orthology Viewer: PT07G09670 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT07G09670 | 1 | |
Anchor point | PT05G07230 PT02G10020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT02G02680 PT05G23570 PT05G07230 ... | 6 | ||
Tree-based ortholog | PT05G07230 PT05G23570 PT07G01430 ... | 6 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT5G10390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G40030 | 1 | ||
Tree-based ortholog | many-to-many | AT5G10980 AT4G40030 AT4G40040 | 3 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD1G49997 BD5G11920 BD1G49990 | 3 | |
Tree-based ortholog | many-to-many | BD1G49997 BD1G49990 BD5G11920 | 3 | ||
Carica papaya | Anchor point | many-to-many | CP00036G01690 CP00055G00740 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00055G00740 CP00036G01690 | 2 | ||
Tree-based ortholog | many-to-many | CP00036G01690 CP00055G00740 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR17G02810 CR06G03730 CR06G04070 ... | 32 | |
Tree-based ortholog | many-to-many | CR16G04260 CR02G08220 CR03G12050 | 3 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV245076G00010 HV2553807G00010 HV12310G00010 | 3 | |
Tree-based ortholog | many-to-many | HV245076G00010 HV12310G00010 HV2553807G00010 | 3 | ||
Musa acuminata | Anchor point | many-to-1 | MA03G06690 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA09G15330 | 1 | ||
Tree-based ortholog | many-to-1 | MA03G06690 | 1 | ||
Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_03G25960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G25960 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_03G25960 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS03G27310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS03G27310 OS06G04030 | 2 | ||
Tree-based ortholog | many-to-many | OS03G27310 OS06G04030 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G00170 | 1 | |
Tree-based ortholog | many-to-1 | OL01G04110 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00003G02430 PP00003G01390 PP00003G01380 | 3 | |
Tree-based ortholog | many-to-many | PP00003G02430 PP00003G01380 PP00003G01390 | 3 | ||
Setaria italica | Anchor point | many-to-many | SI009G39140 SI001G21410 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI007G12370 SI009G39140 | 2 | ||
Tree-based ortholog | many-to-many | SI001G21410 SI009G39140 SI004G02080 ... | 4 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL11G010230 SL04G074580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL05G051500 SL04G081150 SL04G074580 ... | 4 | ||
Tree-based ortholog | many-to-many | SL11G010230 SL04G074580 SL04G081150 ... | 4 | ||
Sorghum bicolor | Anchor point | many-to-many | SB04G023645 SB01G033550 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SB10G002040 SB01G033550 | 2 | ||
Tree-based ortholog | many-to-many | SB01G033550 SB10G002040 | 2 | ||
Vitis vinifera | Anchor point | many-to-1 | VV07G02690 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G17530 | 1 | ||
Tree-based ortholog | many-to-many | VV18G10020 VV04G00980 VV07G02690 ... | 4 | ||
Zea mays | Anchor point | many-to-1 | ZM05G31490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G05710 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G31490 ZM09G05710 ZM01G17300 ... | 4 |