Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT06G27460
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G27460 | 1 |  |
| Anchor point | PT18G00550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT06G27460 PT18G00550 | 2 | ||
| Tree-based ortholog | PT18G00550 PT06G27460 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT5G24880 AT5G10660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G24880 AT5G10660 | 2 | ||
| Tree-based ortholog | many-to-many | AT5G10660 AT5G24880 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G05100 | 1 | |
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00023G00150 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV136256G00020 | 1 | |
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA08G02900 MA06G35730 MA09G09570 ... | 5 | |
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G09800 | 1 | |
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G21710 | 1 | |
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G25480 | 1 | |
| Solanum lycopersicum | Anchor point | 1-to-1 | SL12G096410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL12G096400 SL08G069020 | 2 | ||
| Tree-based ortholog | many-to-1 | SL12G096410 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G040780 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G14270 | 1 | |