Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT06G24080
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G24080 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT06G24070 PT06G24080 | 2 | ||
| Tree-based ortholog | PT06G24080 PT06G24070 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G59970 AT1G24140 AT1G70170 | 3 | |
| Tree-based ortholog | many-to-many | AT1G24140 AT1G70170 AT1G59970 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G44690 | 1 | |
| Tree-based ortholog | many-to-many | BD1G44690 BD3G59680 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00005G03280 | 1 | |
| Tree-based ortholog | many-to-1 | CP00005G03280 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR14G00300 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1571951G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV136899G00010 HV1571951G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G20350 MA09G18670 | 2 | |
| Tree-based ortholog | many-to-many | MA07G20350 MA09G18670 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G48970 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_06G12720 OSINDICA_02G48970 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G50730 | 1 | |
| Tree-based ortholog | many-to-many | OS06G13180 OS02G50730 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00184G00030 | 1 | |
| Tree-based ortholog | many-to-1 | PP00252G00100 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI004G10660 SI004G10700 | 2 | |
| Tree-based ortholog | many-to-many | SI004G10660 SI004G10700 SI001G32800 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL04G005040 SL04G005050 | 2 | |
| Tree-based ortholog | many-to-many | SL04G005050 SL04G005040 SL05G006360 | 3 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G028370 | 1 | |
| Tree-based ortholog | many-to-many | SB10G008650 SB04G028370 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV14G12270 VV14G12250 VV14G12260 ... | 4 | |
| Tree-based ortholog | many-to-many | VV14G12270 VV14G12260 VV03G05690 ... | 5 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G00420 | 1 | |
| Tree-based ortholog | many-to-many | ZM09G00420 ZM05G39870 | 2 |