Integrative Orthology Viewer: PT06G17850 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT03G11460 PT06G17850 PT18G10040 | 3 | |
Anchor point | PT18G10040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT06G17850 PT18G10040 | 2 | ||
Tree-based ortholog | PT18G10040 PT06G17850 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT4G30440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G30440 | 1 | ||
Tree-based ortholog | many-to-1 | AT4G30440 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G47000 BD4G34430 | 2 | |
Anchor point | 1-to-1 | BD3G53830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G53830 | 1 | ||
Tree-based ortholog | many-to-many | BD3G53830 BD1G47000 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00018G01030 CP00029G00930 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00127G00490 | 1 | ||
Tree-based ortholog | many-to-1 | CP00127G00490 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G07040 | 1 | |
Tree-based ortholog | many-to-1 | CR06G07040 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-1 | HV60593G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV50316G00010 | 1 | ||
Tree-based ortholog | many-to-1 | HV50316G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-many | MA03G04920 MA05G04850 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G16670 MA09G13800 MA04G02080 ... | 5 | ||
Tree-based ortholog | many-to-many | MA05G04850 MA03G04920 MA04G02080 ... | 7 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_02G53120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G53120 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_02G53120 OSINDICA_06G08150 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G14540 | 1 | |
Anchor point | 1-to-1 | OS02G54890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G54890 | 1 | ||
Tree-based ortholog | many-to-many | OS02G54890 OS06G08810 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL02G05690 OL18G00770 | 2 | |
Tree-based ortholog | many-to-many | OL02G05690 OL18G00770 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00002G02400 PP00114G00430 PP00219G00050 ... | 9 | |
Tree-based ortholog | many-to-many | PP00011G01110 PP00002G02400 PP00038G00960 ... | 9 | ||
Setaria italica | Anchor point | 1-to-1 | SI001G36260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G36260 | 1 | ||
Tree-based ortholog | many-to-many | SI001G36260 SI004G04650 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL07G006220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G006220 | 1 | ||
Tree-based ortholog | many-to-many | SL07G006220 SL12G010540 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB07G026520 SB10G005920 | 2 | |
Anchor point | 1-to-1 | SB04G035630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G035630 | 1 | ||
Tree-based ortholog | many-to-many | SB04G035630 SB10G005920 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G10320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV16G03600 VV02G00940 VV00G10320 | 3 | ||
Tree-based ortholog | many-to-1 | VV15G09360 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM05G42940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G42940 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G42940 ZM04G26150 ZM09G02590 ... | 8 |