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Integrative Orthology Viewer:
PT06G10880
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G10880 | 1 |  |
| Anchor point | PT16G13730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT16G13730 PT06G10880 | 2 | ||
| Tree-based ortholog | PT06G10880 PT16G13730 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G52850 | 1 | |
| Tree-based ortholog | many-to-many | AT2G30290 AT3G52850 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD4G44380 BD1G63210 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G44380 | 1 | ||
| Tree-based ortholog | many-to-1 | BD4G44380 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00086G00590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00086G00590 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00086G00590 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G05660 | 1 | |
| Tree-based ortholog | many-to-1 | CR02G05660 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV140020G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV1563554G00010 HV72000G00010 HV140020G00010 | 3 | ||
| Musa acuminata | Anchor point | 1-to-many | MA11G20450 MA07G22570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G22570 MA11G20450 | 2 | ||
| Tree-based ortholog | many-to-many | MA00G25340 MA07G22570 MA11G20450 | 3 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_12G01490 OSINDICA_11G00820 OSINDICA_03G20730 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSINDICA_11G00820 OSINDICA_12G01490 | 2 | ||
| Tree-based ortholog | many-to-many | OSINDICA_11G00820 OSINDICA_12G01490 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS12G02390 OS03G21720 OS11G02464 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS12G02390 OS11G02464 | 2 | ||
| Tree-based ortholog | many-to-many | OS11G02464 OS12G02390 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G00030 | 1 | |
| Tree-based ortholog | many-to-1 | OL08G00030 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00200G00240 PP00002G01630 PP00039G01410 ... | 6 | |
| Tree-based ortholog | many-to-many | PP00039G01620 PP00039G01410 PP00002G01650 ... | 8 | ||
| Setaria italica | Anchor point | 1-to-many | SI007G30950 SI008G01270 SI009G42590 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI007G30950 SI008G01270 | 2 | ||
| Tree-based ortholog | many-to-many | SI007G30950 SI008G01270 | 2 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL09G015670 SL10G074980 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G074980 SL09G015670 | 2 | ||
| Tree-based ortholog | many-to-many | SL10G074980 SL09G015670 | 2 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB01G036170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB05G001160 | 1 | ||
| Tree-based ortholog | many-to-many | SB05G001160 SB09G017805 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV08G05780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G05780 | 1 | ||
| Tree-based ortholog | many-to-1 | VV08G03880 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM07G30150 ZM09G21540 ZM04G28550 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G25680 | 1 | ||
| Tree-based ortholog | many-to-many | ZM02G25680 ZM04G28550 | 2 |