Integrative Orthology Viewer: PT06G04690 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G04690 | 1 | |
Anchor point | PT16G04340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT06G04690 PT16G04340 | 2 | ||
Tree-based ortholog | PT16G04340 PT06G04690 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT2G41540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G41540 | 1 | ||
Tree-based ortholog | many-to-1 | AT2G41540 | 1 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD2G52570 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G60390 | 1 | ||
Tree-based ortholog | many-to-many | BD2G52570 BD2G21150 BD2G60390 | 3 | ||
Carica papaya | Anchor point | 1-to-1 | CP00182G00130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00182G00130 | 1 | ||
Tree-based ortholog | many-to-1 | CP00182G00130 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G03160 | 1 | |
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV51863G00010 | 1 | |
Tree-based ortholog | many-to-many | HV137283G00010 HV38664G00010 HV51863G00010 | 3 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA11G06000 MA08G10190 | 2 | |
Tree-based ortholog | many-to-many | MA11G06000 MA08G10190 MA08G24650 ... | 4 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G67660 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_01G55740 OSINDICA_05G37310 OSINDICA_01G67660 | 3 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G71280 | 1 | |
Tree-based ortholog | many-to-many | OS01G58740 OS05G41590 OS01G71280 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00323G00050 PP00114G01130 | 2 | |
Tree-based ortholog | many-to-many | PP00323G00050 PP00114G01130 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G45950 | 1 | |
Tree-based ortholog | many-to-many | SI005G35820 SI003G19530 SI007G20970 ... | 5 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL04G016330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G016330 | 1 | ||
Tree-based ortholog | many-to-1 | SL04G016330 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G045390 | 1 | |
Tree-based ortholog | many-to-many | SB03G037280 SB09G024310 SB03G045390 | 3 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV08G07030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G07030 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G07030 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G21360 | 1 | |
Tree-based ortholog | many-to-many | ZM08G33380 ZM08G18680 ZM03G21360 | 3 |