Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT06G04650
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G04650 | 1 |  |
| Anchor point | PT01G02060 PT03G20400 PT16G04300 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT06G04650 PT16G04310 | 2 | ||
| Tree-based ortholog | PT06G04650 PT16G04310 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-many | AT3G57330 AT2G41560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G41560 AT3G57330 | 2 | ||
| Tree-based ortholog | many-to-many | AT2G41560 AT3G57330 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G43300 | 1 | |
| Tree-based ortholog | many-to-many | BD4G43300 BD2G60324 | 2 | ||
| Carica papaya | Anchor point | many-to-1 | CP00182G00100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00182G00100 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00197G00190 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR16G08980 CR12G04490 CR02G12370 ... | 4 | |
| Tree-based ortholog | many-to-many | CR16G08980 CR02G12370 CR12G04490 ... | 5 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV138554G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV159041G00010 HV138554G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G11320 MA03G30850 | 2 | |
| Tree-based ortholog | many-to-many | MA05G08290 MA09G18190 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_11G02840 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_12G03320 OSINDICA_11G02840 OSINDICA_01G67620 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G04220 | 1 | |
| Tree-based ortholog | many-to-many | OS12G04220 OS11G04460 OS01G71240 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G01960 | 1 | |
| Tree-based ortholog | many-to-1 | OL09G01960 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00037G01670 | 1 | |
| Tree-based ortholog | many-to-1 | PP00037G01670 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI008G02440 SI007G32330 | 2 | |
| Tree-based ortholog | many-to-many | SI007G32330 SI008G02440 SI005G45930 | 3 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL10G079300 SL04G016260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL04G016260 SL10G079300 | 2 | ||
| Tree-based ortholog | many-to-many | SL04G016260 SL10G079300 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB08G001260 | 1 | |
| Tree-based ortholog | many-to-many | SB05G002380 SB08G001260 SB03G045370 | 3 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV08G07070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G07070 | 1 | ||
| Tree-based ortholog | many-to-1 | VV08G07070 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G29350 | 1 | |
| Tree-based ortholog | many-to-many | ZM10G00390 ZM04G29350 ZM03G21470 ... | 4 |