Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT06G04390
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT06G04390 | 1 |  |
| Anchor point | PT16G04110 PT03G20140 PT01G02410 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT16G04110 PT06G04390 | 2 | ||
| Tree-based ortholog | PT06G04390 PT16G04110 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-1 | AT5G04020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G04020 | 1 | ||
| Tree-based ortholog | many-to-1 | AT5G04020 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G27020 | 1 | |
| Tree-based ortholog | many-to-many | BD2G27020 BD2G60780 | 2 | ||
| Carica papaya | Anchor point | many-to-1 | CP00005G01800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00005G01800 | 1 | ||
| Tree-based ortholog | many-to-many | CP00005G01810 CP00005G01800 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1562477G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV1562477G00010 HV134471G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA11G05940 | 1 | |
| Tree-based ortholog | many-to-1 | MA11G05940 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G68570 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_05G27980 OSINDICA_01G68570 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G72190 | 1 | |
| Tree-based ortholog | many-to-many | OS05G31690 OS01G72190 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G26500 | 1 | |
| Tree-based ortholog | many-to-many | SI003G26500 SI005G46580 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL04G017750 SL10G079790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL04G017750 SL10G079790 | 2 | ||
| Tree-based ortholog | many-to-many | SL04G017750 SL10G079790 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G018880 | 1 | |
| Tree-based ortholog | many-to-many | SB09G018880 SB03G045870 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G09750 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G23240 | 1 | |
| Tree-based ortholog | many-to-many | ZM06G23240 ZM08G27860 ZM03G20880 | 3 |