Integrative Orthology Viewer: PT05G16880 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT05G16880 | 1 | |
Anchor point | PT02G09440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT05G16880 | 1 | ||
Tree-based ortholog | PT05G16880 PT02G09440 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT1G22200 AT1G36050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G36050 | 1 | ||
Tree-based ortholog | many-to-many | AT1G22200 AT1G36050 | 2 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G12110 | 1 | |
Tree-based ortholog | many-to-many | BD1G63940 BD2G21760 | 2 | ||
Carica papaya | Anchor point | 1-to-1 | CP00036G01140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00036G01140 | 1 | ||
Tree-based ortholog | many-to-1 | CP00036G01140 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G04160 | 1 | |
Tree-based ortholog | many-to-1 | CR13G04160 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV126185G00010 | 1 | |
Tree-based ortholog | many-to-many | HV126185G00010 HV50357G00010 | 2 | ||
Musa acuminata | Anchor point | 1-to-1 | MA03G04390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA10G02800 MA03G04390 | 2 | ||
Tree-based ortholog | many-to-many | MA10G00400 MA00G12630 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G29850 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_03G19570 OSINDICA_05G36850 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G38340 | 1 | |
Tree-based ortholog | many-to-many | OS03G20520 OS05G41120 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G02060 | 1 | |
Tree-based ortholog | many-to-many | OL08G00200 OL10G00140 OL01G02060 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00038G01560 | 1 | |
Tree-based ortholog | many-to-many | PP00054G00080 PP00015G01950 PP00072G00710 ... | 4 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI007G12630 | 1 | |
Tree-based ortholog | many-to-many | SI009G43440 SI003G19970 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL04G072910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G072910 | 1 | ||
Tree-based ortholog | many-to-1 | SL04G072910 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G018670 | 1 | |
Tree-based ortholog | many-to-many | SB01G036890 SB09G023960 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV18G03350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G03350 | 1 | ||
Tree-based ortholog | many-to-1 | VV18G03350 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G13500 | 1 | |
Tree-based ortholog | many-to-many | ZM06G27150 ZM08G18420 | 2 |