Integrative Orthology Viewer: PT05G07560 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT05G07560 PT07G09280 | 2 | |
Anchor point | PT07G09280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT07G09280 PT05G07560 | 2 | ||
Tree-based ortholog | PT07G09280 PT05G07560 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT5G65000 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G65000 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G65000 | 1 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD3G46580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G46580 | 1 | ||
Tree-based ortholog | many-to-1 | BD3G46580 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00036G01940 | 1 | |
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1581313G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV1581313G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-1 | MA09G15140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA09G15190 | 1 | ||
Tree-based ortholog | many-to-many | MA09G15180 MA00G28480 MA09G15140 ... | 5 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_02G35200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G35200 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_02G35200 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS02G36390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G36390 | 1 | ||
Tree-based ortholog | many-to-1 | OS02G36390 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL05G02500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL05G02500 | 1 | ||
Tree-based ortholog | many-to-1 | OL05G02500 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00198G00410 | 1 | |
Tree-based ortholog | many-to-1 | PP00198G00410 | 1 | ||
Setaria italica | Anchor point | 1-to-1 | SI001G21500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G21500 | 1 | ||
Tree-based ortholog | many-to-1 | SI001G21500 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G051590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G051590 | 1 | ||
Tree-based ortholog | many-to-1 | SL05G051590 | 1 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB04G023690 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G023690 | 1 | ||
Tree-based ortholog | many-to-1 | SB04G023690 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G03130 | 1 | |
Tree-based ortholog | many-to-1 | VV00G03130 | 1 | ||
Zea mays | Anchor point | 1-to-many | ZM04G17070 ZM05G31570 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G31570 | 1 | ||
Tree-based ortholog | many-to-many | ZM04G17070 ZM05G31570 | 2 |