Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT05G02630
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT05G02630 | 1 |  |
| Anchor point | PT13G01790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT05G02630 PT13G01790 | 2 | ||
| Tree-based ortholog | PT05G02630 PT13G01790 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-1 | AT3G05470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G05470 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G05470 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G12470 | 1 | |
| Tree-based ortholog | many-to-1 | BD3G36510 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00048G00830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00048G00830 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00048G00830 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G05620 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G05620 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV6806G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV6806G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA07G19190 | 1 | |
| Tree-based ortholog | many-to-1 | MA07G19190 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G31480 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_08G31480 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G33430 | 1 | |
| Tree-based ortholog | many-to-1 | OS08G33430 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL06G01310 | 1 | |
| Tree-based ortholog | many-to-1 | OL07G01070 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00344G00070 PP00122G00670 PP00017G00290 | 3 | |
| Tree-based ortholog | many-to-many | PP00071G00570 PP00017G00290 PP00156G00760 ... | 4 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G13100 | 1 | |
| Tree-based ortholog | many-to-1 | SI006G15660 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL01G099650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G099650 | 1 | ||
| Tree-based ortholog | many-to-1 | SL01G099650 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G021060 | 1 | |
| Tree-based ortholog | many-to-1 | SB07G021060 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV14G08680 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G08680 | 1 | ||
| Tree-based ortholog | many-to-1 | VV14G08680 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G38480 | 1 | |
| Tree-based ortholog | many-to-1 | ZM01G38480 | 1 |