Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT04G17370
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | PT04G17370 PT09G13300 | 2 |  |
| Tree-based ortholog | PT04G17370 PT09G13300 | 2 | ||
| Orthologous gene family | PT04G17370 | 1 | ||
| Anchor point | PT09G13300 PT07G05620 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G38630 | 1 | |
| Anchor point | many-to-1 | AT4G38630 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G68290 | 1 | |
| Anchor point | many-to-1 | BD1G68290 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00006G02670 | 1 | |
| Tree-based ortholog | many-to-1 | CP00037G01530 | 1 | ||
| Orthologous gene family | 1-to-many | CP00006G02670 CP00037G01530 | 2 | ||
| Anchor point | many-to-many | CP00006G02670 CP00037G01530 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR16G04720 | 1 | |
| Tree-based ortholog | many-to-1 | CR16G04720 | 1 | ||
| Orthologous gene family | 1-to-1 | CR16G04720 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV97935G00010 | 1 | |
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G26300 MA11G01110 MA02G11480 | 3 | |
| Tree-based ortholog | many-to-many | MA04G26300 MA02G11480 MA11G01110 | 3 | ||
| Orthologous gene family | 1-to-1 | MA04G26300 | 1 | ||
| Anchor point | many-to-1 | MA11G01110 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G12370 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_03G48750 OSINDICA_03G12370 | 2 | ||
| Orthologous gene family | 1-to-1 | OSINDICA_03G12370 | 1 | ||
| Anchor point | many-to-1 | OSINDICA_03G12370 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G13970 | 1 | |
| Tree-based ortholog | many-to-1 | OS10G05180 | 1 | ||
| Anchor point | many-to-many | OS03G13970 OS10G05180 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G01540 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00014G01730 | 1 | |
| Tree-based ortholog | many-to-1 | PP00014G01730 | 1 | ||
| Orthologous gene family | 1-to-1 | PP00014G01730 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G48720 | 1 | |
| Anchor point | many-to-many | SI009G29980 SI009G48720 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G083710 | 1 | |
| Tree-based ortholog | many-to-1 | SL02G083710 | 1 | ||
| Orthologous gene family | 1-to-1 | SL02G083710 | 1 | ||
| Anchor point | many-to-many | SL02G083710 SL03G033430 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G041330 | 1 | |
| Tree-based ortholog | many-to-1 | SB01G026350 | 1 | ||
| Anchor point | many-to-1 | SB01G041330 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G00560 | 1 | |
| Anchor point | many-to-1 | VV04G00560 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G24880 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G24120 ZM01G09470 | 2 | ||
| Orthologous gene family | 1-to-1 | ZM01G09470 | 1 | ||
| Anchor point | many-to-many | ZM01G09470 ZM09G24880 | 2 |