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Integrative Orthology Viewer:
PT04G12060
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT04G12060 PT17G09450 | 2 |  |
| Anchor point | PT10G15790 PT08G09650 PT17G09450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT17G09450 PT04G12060 | 2 | ||
| Tree-based ortholog | PT17G09450 PT04G12060 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-1 | AT1G13740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G13740 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G02140 | 1 | ||
| Brachypodium distachyon | Anchor point | many-to-1 | BD1G69940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G22180 | 1 | ||
| Tree-based ortholog | many-to-many | BD1G69940 BD1G59982 BD1G22180 ... | 4 | ||
| Carica papaya | Anchor point | many-to-1 | CP00014G01830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00014G01830 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00014G01830 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV40662G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV241088G00010 HV40662G00010 HV62375G00010 | 3 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MA04G14840 MA06G28140 MA07G27280 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G14840 MA09G07230 MA03G31160 ... | 6 | ||
| Tree-based ortholog | many-to-many | MA04G33790 MA05G01510 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_03G10080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G10080 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_03G10080 OSINDICA_03G28940 OSINDICA_07G33480 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS03G11550 OS03G30570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G11550 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G11550 OS03G30570 OS07G41160 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00336G00200 PP00257G00710 | 2 | |
| Setaria italica | Anchor point | many-to-1 | SI009G50690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G39020 | 1 | ||
| Tree-based ortholog | many-to-many | SI009G50690 SI002G39020 SI009G37520 ... | 4 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL05G012210 SL02G088910 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL04G005380 SL05G012210 | 2 | ||
| Tree-based ortholog | many-to-many | SL02G032720 SL02G066890 SL02G066900 ... | 13 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB01G042880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G038620 | 1 | ||
| Tree-based ortholog | many-to-many | SB10G008970 SB01G042880 SB02G038620 ... | 4 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV01G10510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G10510 | 1 | ||
| Tree-based ortholog | many-to-1 | VV01G10510 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM09G19640 ZM01G18240 | 2 | |
| Tree-based ortholog | many-to-many | ZM09G25910 ZM07G26580 ZM01G18240 ... | 4 |