Integrative Orthology Viewer: PT04G09140 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT04G09120 PT04G09140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | PT04G09140 PT17G12370 PT04G09120 | 3 | ||
Tree-based ortholog | PT04G09140 PT04G09120 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G07790 AT3G45980 AT5G59910 | 3 | |
Tree-based ortholog | many-to-many | AT1G07790 AT5G22880 AT3G46030 ... | 6 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G08860 | 1 | |
Tree-based ortholog | many-to-many | BD2G54540 BD1G66380 BD1G08860 ... | 11 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00190G00240 | 1 | |
Tree-based ortholog | many-to-1 | CP00190G00170 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR06G03690 CR06G04410 CR06G05100 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G12260 | 1 | ||
Tree-based ortholog | many-to-many | CR13G06520 CR13G06630 CR12G04440 ... | 28 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV97394G00010 HV61435G00010 | 2 | |
Tree-based ortholog | many-to-many | HV2124636G00010 HV72696G00010 HV7478G00010 ... | 11 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MA02G19540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G15660 MA02G19540 | 2 | ||
Tree-based ortholog | many-to-many | MA02G19540 MA07G15660 MA06G34170 | 3 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G05070 OSINDICA_01G05400 OSINDICA_01G58920 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G15560 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_01G58920 OSINDICA_03G15560 OSINDICA_08G36640 ... | 12 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G05630 OS01G62230 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G17084 | 1 | ||
Tree-based ortholog | many-to-many | OS01G62230 OS03G17084 OS08G38300 ... | 10 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL08G01790 OL12G01030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL12G01030 OL08G01790 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00117G00010 PP00098G01280 PP00098G01260 ... | 8 | |
Tree-based ortholog | many-to-many | PP00098G01260 PP00056G00950 PP00037G01110 ... | 9 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI005G10730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G38380 | 1 | ||
Tree-based ortholog | many-to-many | SI005G38380 SI009G46380 SI005G26220 ... | 9 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G007920 | 1 | |
Tree-based ortholog | many-to-1 | SL06G075800 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G030340 | 1 | |
Tree-based ortholog | many-to-many | SB03G039310 SB09G022610 SB03G005720 ... | 12 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G04050 | 1 | |
Tree-based ortholog | many-to-many | VV06G04060 VV06G04070 VV06G04050 ... | 4 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G14910 | 1 | |
Tree-based ortholog | many-to-many | ZM08G32150 ZM03G27460 ZM03G04800 ... | 14 |