Integrative Orthology Viewer: PT04G06230 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT04G06230 | 1 | |
Anchor point | PT11G07170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT04G06230 PT11G07170 | 2 | ||
Tree-based ortholog | PT04G06230 PT11G07170 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT4G18870 AT5G45710 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G18880 | 1 | ||
Tree-based ortholog | many-to-many | AT5G45710 AT4G18880 | 2 | ||
Brachypodium distachyon | Anchor point | 1-to-many | BD3G08870 BD2G49860 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G49860 | 1 | ||
Tree-based ortholog | many-to-1 | BD2G49860 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00124G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00124G00010 | 1 | ||
Tree-based ortholog | many-to-1 | CP00124G00010 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G04630 | 1 | |
Tree-based ortholog | many-to-1 | CR07G09930 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV6549G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV6549G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-many | MA07G25390 MA08G28450 MA09G05810 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G15960 MA06G32590 | 2 | ||
Tree-based ortholog | many-to-many | MA03G15960 MA06G32590 | 2 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_01G51490 OSINDICA_02G12780 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G51490 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_01G51490 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS06G35960 OS01G54550 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G54550 | 1 | ||
Tree-based ortholog | many-to-1 | OS01G54550 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL19G00010 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00042G00640 PP00249G00480 PP00084G00460 | 3 | |
Tree-based ortholog | many-to-many | PP00019G00750 PP00085G00130 PP00012G00150 ... | 4 | ||
Setaria italica | Anchor point | 1-to-1 | SI005G32560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G32560 | 1 | ||
Tree-based ortholog | many-to-1 | SI005G32560 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL07G055710 SL02G072000 SL03G006000 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL02G072000 SL03G006000 | 2 | ||
Tree-based ortholog | many-to-many | SL02G072000 SL03G006000 | 2 | ||
Sorghum bicolor | Anchor point | 1-to-many | SB03G034630 SB04G008300 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G034630 | 1 | ||
Tree-based ortholog | many-to-1 | SB03G034630 | 1 | ||
Vitis vinifera | Anchor point | 1-to-many | VV12G03430 VV10G02600 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV10G02600 | 1 | ||
Tree-based ortholog | many-to-1 | VV10G02600 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G34950 | 1 | |
Tree-based ortholog | many-to-1 | ZM08G34950 | 1 |