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Integrative Orthology Viewer:
PT03G12030
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G11170 PT03G12030 PT03G12040 | 3 |  |
| Anchor point | PT01G11170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT01G11170 PT03G12030 | 2 | ||
| Tree-based ortholog | PT01G11170 PT03G12040 PT03G12030 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G11820 | 1 | |
| Anchor point | 1-to-1 | AT4G11820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G11820 | 1 | ||
| Tree-based ortholog | many-to-1 | AT4G11820 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD3G42010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G42010 | 1 | ||
| Tree-based ortholog | many-to-many | BD1G77290 BD3G42010 | 2 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00029G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00029G00220 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00029G00220 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G09580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR16G09580 | 1 | ||
| Tree-based ortholog | many-to-1 | CR16G09580 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV38474G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV46873G00010 | 1 | ||
| Tree-based ortholog | many-to-many | HV38474G00010 HV46873G00010 | 2 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA04G04870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G00970 MA04G04870 | 2 | ||
| Tree-based ortholog | many-to-many | MA09G00970 MA04G04870 MA03G12610 | 3 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_08G41800 | 1 | |
| Anchor point | 1-to-1 | OSINDICA_09G27750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G27750 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_03G01710 OSINDICA_09G27750 OSINDICA_08G41800 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G02710 OS08G43170 OS09G34960 | 3 | |
| Anchor point | 1-to-1 | OS08G43170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G43170 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G02710 OS09G34960 OS08G43170 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00154G00620 PP00180G00640 | 2 | |
| Tree-based ortholog | many-to-many | PP00154G00620 PP00180G00640 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI002G28610 | 1 | |
| Anchor point | 1-to-many | SI009G58360 SI002G28610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G28610 | 1 | ||
| Tree-based ortholog | many-to-many | SI009G58360 SI006G23560 SI002G28610 | 3 | ||
| Solanum lycopersicum | Anchor point | 1-to-many | SL08G080160 SL12G056450 SL08G007790 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL12G056450 SL08G007790 SL08G080170 | 3 | ||
| Tree-based ortholog | many-to-many | SL08G080170 SL08G080160 | 2 | ||
| Sorghum bicolor | Orthologous gene family | many-to-1 | SB07G025240 | 1 | |
| Anchor point | 1-to-1 | SB07G025240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G025240 | 1 | ||
| Tree-based ortholog | many-to-many | SB01G049310 SB07G025240 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV02G07400 VV16G02780 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV02G07400 | 1 | ||
| Tree-based ortholog | many-to-1 | VV14G05510 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM02G33840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G33840 | 1 | ||
| Tree-based ortholog | many-to-1 | ZM04G33770 | 1 |