Integrative Orthology Viewer: PT03G08510 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G14930 PT02G14010 PT03G08510 | 3 | |
Anchor point | PT01G14930 PT02G14010 PT14G05240 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT14G05240 PT03G08510 PT01G14930 | 3 | ||
Tree-based ortholog | PT01G14930 PT03G08510 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G10950 AT3G60245 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G10950 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G10950 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD2G17040 BD2G46580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BD2G46580 BD2G17040 | 2 | ||
Tree-based ortholog | many-to-many | BD2G46580 BD2G17040 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00098G00510 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00098G00510 | 1 | ||
Tree-based ortholog | many-to-1 | CP00098G00510 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G01990 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G01990 | 1 | ||
Tree-based ortholog | many-to-1 | CR06G01990 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV2551213G00010 HV41238G00020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | HV2551213G00010 HV47084G00010 HV41238G00020 | 3 | ||
Tree-based ortholog | many-to-many | HV2551213G00010 HV41238G00020 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G16820 MA01G05030 MA09G06340 ... | 6 | |
Tree-based ortholog | many-to-1 | MA03G16820 | 1 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_01G46150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G42460 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_01G46150 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G48320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G48320 | 1 | ||
Tree-based ortholog | many-to-many | OS05G48320 OS01G48770 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL14G00090 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00002G01530 PP00200G00220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00002G01530 PP00200G00220 PP00076G00270 ... | 5 | ||
Tree-based ortholog | many-to-many | PP00200G00220 PP00002G01530 PP00014G01030 | 3 | ||
Setaria italica | Orthologous gene family | many-to-many | SI005G27810 SI007G07260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI007G07260 SI005G27810 | 2 | ||
Tree-based ortholog | many-to-many | SI005G27810 SI007G07260 | 2 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL08G007140 SL10G061970 SL08G077710 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL08G007140 SL08G077720 SL10G061970 | 3 | ||
Tree-based ortholog | many-to-1 | SL08G077710 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SB04G003900 SB09G028040 SB06G012050 | 3 | |
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G01530 | 1 | |
Anchor point | many-to-many | VV15G01530 VV02G03260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV02G03260 | 1 | ||
Tree-based ortholog | many-to-1 | VV15G01530 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G17860 ZM04G39820 ZM05G19790 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G39820 ZM02G17860 | 2 | ||
Tree-based ortholog | many-to-many | ZM05G19790 ZM02G17860 ZM04G39820 | 3 |