Integrative Orthology Viewer: PT01G40630 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G40630 PT11G12700 | 2 | |
Anchor point | PT04G03580 PT11G04410 PT11G12700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT11G12700 PT01G40630 | 2 | ||
Tree-based ortholog | PT11G04410 PT04G03580 PT01G40630 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT5G54310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G54310 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G54310 | 1 | ||
Brachypodium distachyon | Anchor point | many-to-1 | BD1G24680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G24680 | 1 | ||
Tree-based ortholog | many-to-1 | BD1G24680 | 1 | ||
Carica papaya | Anchor point | many-to-many | CP00080G01130 CP00027G01090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00080G01130 | 1 | ||
Tree-based ortholog | many-to-1 | CP00027G01090 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G14350 | 1 | |
Tree-based ortholog | many-to-1 | CR06G14350 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-1 | HV1562751G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1562751G00010 | 1 | ||
Tree-based ortholog | many-to-1 | HV1562751G00010 | 1 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MA04G24430 | 1 | |
Anchor point | many-to-many | MA01G09110 MA05G26940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA05G26940 MA11G26810 MA04G24430 ... | 4 | ||
Tree-based ortholog | many-to-many | MA11G26810 MA05G26940 MA08G07730 | 3 | ||
Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_07G29970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G29970 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_07G29970 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS07G37650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G37650 | 1 | ||
Tree-based ortholog | many-to-1 | OS07G37650 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G02300 | 1 | |
Tree-based ortholog | many-to-many | OL05G00710 OL03G03570 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00037G01650 PP00149G00130 | 2 | |
Tree-based ortholog | many-to-many | PP00037G01650 PP00149G00130 | 2 | ||
Setaria italica | Anchor point | many-to-1 | SI002G36230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G36230 | 1 | ||
Tree-based ortholog | many-to-1 | SI002G36230 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL07G063550 | 1 | |
Anchor point | many-to-many | SL10G006850 SL07G063550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G063550 | 1 | ||
Tree-based ortholog | many-to-many | SL07G063550 SL10G006850 | 2 | ||
Sorghum bicolor | Anchor point | many-to-1 | SB02G036460 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G036460 | 1 | ||
Tree-based ortholog | many-to-1 | SB02G036460 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV19G03610 | 1 | |
Anchor point | many-to-1 | VV19G03610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV19G03610 | 1 | ||
Tree-based ortholog | many-to-1 | VV19G03610 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM07G24400 | 1 | |
Anchor point | many-to-1 | ZM07G24400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G24400 | 1 | ||
Tree-based ortholog | many-to-1 | ZM07G24400 | 1 |