Integrative Orthology Viewer: PT01G26540 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G26540 | 1 | |
Anchor point | PT09G06050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT09G06050 PT01G26540 PT01G26560 | 3 | ||
Tree-based ortholog | PT01G26560 PT01G26590 PT01G26540 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G63520 | 1 | |
Tree-based ortholog | many-to-1 | AT3G63520 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G00335 | 1 | |
Tree-based ortholog | many-to-many | BD4G00330 BD4G00335 | 2 | ||
Carica papaya | Anchor point | 1-to-1 | CP00125G00070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00125G00070 | 1 | ||
Tree-based ortholog | many-to-1 | CP00125G00070 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR08G02440 CR03G01920 | 2 | |
Tree-based ortholog | many-to-many | CR08G02440 CR03G01920 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV41843G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV41843G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA03G30550 | 1 | |
Tree-based ortholog | many-to-1 | MA03G30550 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_12G32140 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_12G32140 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G44310 | 1 | |
Tree-based ortholog | many-to-1 | OS12G44310 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL02G02010 OL02G02020 | 2 | |
Tree-based ortholog | many-to-many | OL02G02020 OL02G02010 OL08G03990 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00012G01560 PP00132G00060 | 2 | |
Tree-based ortholog | many-to-many | PP00118G01170 PP00328G00150 PP00132G00060 | 3 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G42020 | 1 | |
Tree-based ortholog | many-to-1 | SI003G42020 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL01G087250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G087260 SL01G087250 | 2 | ||
Tree-based ortholog | many-to-many | SL01G087250 SL01G087260 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G047540 | 1 | |
Tree-based ortholog | many-to-1 | SB01G047540 | 1 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV13G07870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV13G07840 VV13G07870 | 2 | ||
Tree-based ortholog | many-to-many | VV13G07840 VV13G07870 | 2 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G28290 | 1 | |
Tree-based ortholog | many-to-1 | ZM09G28290 | 1 |