Integrative Orthology Viewer: PT01G24870 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G24870 PT01G34160 PT01G40110 ... | 14 | |
Anchor point | PT09G04250 PT10G19310 PT08G06400 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | PT01G24870 PT09G04250 | 2 | ||
Tree-based ortholog | PT01G24870 PT09G04250 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-many | AT2G38080 AT5G58910 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G38080 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G58910 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G74320 | 1 | |
Tree-based ortholog | many-to-1 | BD1G74320 | 1 | ||
Carica papaya | Anchor point | many-to-1 | CP00019G02140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00085G00780 CP00085G00790 | 2 | ||
Tree-based ortholog | many-to-many | CP00085G00790 CP00085G00780 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G06860 | 1 | |
Tree-based ortholog | many-to-many | CR01G06860 CR03G04690 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV36783G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV36783G00010 | 1 | ||
Musa acuminata | Anchor point | many-to-1 | MA06G34450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G03810 MA11G24910 MA06G34450 | 3 | ||
Tree-based ortholog | many-to-many | MA11G24910 MA06G34450 MA09G03810 | 3 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_01G59860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_00G30700 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_00G30700 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G48060 | 1 | |
Tree-based ortholog | many-to-1 | OS11G48060 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00077G00890 | 1 | |
Tree-based ortholog | many-to-many | PP00077G00890 PP00206G00320 | 2 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI008G01760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI008G25560 | 1 | ||
Tree-based ortholog | many-to-1 | SI008G25560 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G050530 | 1 | |
Anchor point | many-to-1 | SL06G076760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G076830 SL09G014240 | 2 | ||
Tree-based ortholog | many-to-many | SL10G076830 SL09G014240 SL10G085090 | 3 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB02G000300 SB05G000680 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G039530 | 1 | ||
Tree-based ortholog | many-to-1 | SB03G028920 | 1 | ||
Vitis vinifera | Anchor point | many-to-many | VV08G13250 VV06G02270 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G02270 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G13250 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G27210 | 1 | |
Tree-based ortholog | many-to-many | ZM03G27210 ZM03G27220 ZM01G48750 ... | 7 |