Integrative Orthology Viewer: PT01G24650 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G24650 | 1 | |
Anchor point | PT09G03960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT01G24650 PT09G03960 | 2 | ||
Tree-based ortholog | PT01G24650 PT09G03960 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT2G29530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G29530 | 1 | ||
Tree-based ortholog | many-to-1 | AT2G29530 | 1 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD1G03410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G03410 | 1 | ||
Tree-based ortholog | many-to-1 | BD1G03410 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G06900 | 1 | |
Tree-based ortholog | many-to-1 | CR12G06900 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV158775G00020 | 1 | |
Tree-based ortholog | many-to-1 | HV158775G00020 | 1 | ||
Musa acuminata | Anchor point | 1-to-1 | MA06G15280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA10G14260 | 1 | ||
Tree-based ortholog | many-to-many | MA06G15280 MA10G14260 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G12230 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_07G12230 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G61019 | 1 | |
Tree-based ortholog | many-to-many | OS07G13950 OS03G61019 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL03G00970 | 1 | |
Tree-based ortholog | many-to-1 | OL03G00970 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00028G00900 | 1 | |
Tree-based ortholog | many-to-1 | PP00028G00900 | 1 | ||
Setaria italica | Anchor point | 1-to-1 | SI009G02830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G09270 | 1 | ||
Tree-based ortholog | many-to-many | SI002G09270 SI009G02830 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL06G005840 SL09G011760 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G011760 | 1 | ||
Tree-based ortholog | many-to-1 | SL09G011760 | 1 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB01G002840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G002840 | 1 | ||
Tree-based ortholog | many-to-many | SB02G007270 SB01G002840 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV06G02530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G02530 | 1 | ||
Tree-based ortholog | many-to-1 | VV06G02530 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G58300 | 1 | |
Tree-based ortholog | many-to-many | ZM05G01250 ZM01G58300 | 2 |