Integrative Orthology Viewer: PT01G12440 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G12440 | 1 | |
Anchor point | PT03G10890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT01G12440 | 1 | ||
Tree-based ortholog | PT01G12440 PT03G10890 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT3G47430 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G47430 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G47430 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G16860 | 1 | |
Tree-based ortholog | many-to-1 | BD5G16860 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00055G00200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00055G00200 | 1 | ||
Tree-based ortholog | many-to-1 | CP00055G00200 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G17200 | 1 | |
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV45453G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV45453G00010 | 1 | ||
Musa acuminata | Orthologous gene family | 1-to-1 | MA11G21670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA11G21670 | 1 | ||
Tree-based ortholog | many-to-1 | MA11G21670 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G37270 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_04G37270 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G45210 | 1 | |
Tree-based ortholog | many-to-1 | OS04G45210 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-many | PP00016G01560 PP00025G01240 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00025G01240 PP00016G01560 PP00159G00140 | 3 | ||
Tree-based ortholog | many-to-many | PP00159G00140 PP00025G01240 PP00016G01560 | 3 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI007G18780 | 1 | |
Tree-based ortholog | many-to-1 | SI007G18780 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL03G093180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G093180 | 1 | ||
Tree-based ortholog | many-to-1 | SL03G093180 | 1 | ||
Sorghum bicolor | Orthologous gene family | 1-to-1 | SB06G023730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G023730 | 1 | ||
Tree-based ortholog | many-to-1 | SB06G023730 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV16G04200 | 1 | |
Anchor point | 1-to-1 | VV16G04200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G04200 | 1 | ||
Tree-based ortholog | many-to-1 | VV16G04200 | 1 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM02G08520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G08520 | 1 | ||
Tree-based ortholog | many-to-1 | ZM02G08520 | 1 |