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Integrative Orthology Viewer:
PT01G06060
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT01G06060 | 1 |  |
| Anchor point | PT01G32580 PT03G16700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT03G16700 PT01G32580 PT01G06060 | 3 | ||
| Tree-based ortholog | PT03G16700 PT01G06060 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G14070 AT3G02000 | 2 | |
| Tree-based ortholog | many-to-many | AT5G14070 AT3G02000 | 2 | ||
| Brachypodium distachyon | Orthologous gene family | 1-to-1 | BD3G44240 | 1 | |
| Anchor point | many-to-1 | BD5G08740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G12960 | 1 | ||
| Tree-based ortholog | many-to-many | BD5G08740 BD3G44240 | 2 | ||
| Carica papaya | Anchor point | many-to-1 | CP00070G01160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00070G01160 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00070G01160 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR12G06680 CR12G15000 | 2 | |
| Tree-based ortholog | many-to-1 | CR13G05090 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV39598G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV48203G00010 | 1 | ||
| Musa acuminata | Anchor point | many-to-1 | MA10G12110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA10G12110 MA00G11060 MA06G24530 | 3 | ||
| Tree-based ortholog | many-to-many | MA06G24530 MA10G12110 MA03G19160 ... | 4 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_02G29720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G29720 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_04G24260 OSINDICA_02G29720 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS04G32300 OS02G30850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G30850 | 1 | ||
| Tree-based ortholog | many-to-many | OS04G32300 OS02G30850 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00063G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00063G00030 PP00125G00550 | 2 | ||
| Tree-based ortholog | many-to-many | PP00063G00030 PP00125G00550 | 2 | ||
| Setaria italica | Anchor point | many-to-1 | SI001G18260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G16930 | 1 | ||
| Tree-based ortholog | many-to-many | SI007G08040 SI001G18260 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL01G009890 SL05G015910 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL05G015910 SL01G009890 | 2 | ||
| Tree-based ortholog | many-to-many | SL01G009910 SL01G009900 SL01G009890 ... | 4 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB06G014300 | 1 | |
| Anchor point | many-to-many | SB04G020790 SB06G014300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G014300 | 1 | ||
| Tree-based ortholog | many-to-many | SB06G014300 SB04G020790 | 2 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV01G00810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G00810 | 1 | ||
| Tree-based ortholog | many-to-1 | VV01G00810 | 1 | ||
| Zea mays | Anchor point | many-to-1 | ZM02G17280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G17280 | 1 | ||
| Tree-based ortholog | many-to-many | ZM02G17280 ZM05G29060 | 2 |