Integrative Orthology Viewer: PT01G02630 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G02630 | 1 | |
Anchor point | PT03G19850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT03G19850 PT01G02630 | 2 | ||
Tree-based ortholog | PT01G02630 PT03G19850 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT3G54470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G54470 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G54470 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G60932 | 1 | |
Tree-based ortholog | many-to-many | BD2G60932 BD2G60926 | 2 | ||
Carica papaya | Anchor point | 1-to-1 | CP00223G00100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00223G00110 | 1 | ||
Tree-based ortholog | many-to-1 | CP00223G00110 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G10530 | 1 | |
Tree-based ortholog | many-to-1 | CR01G10530 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1569342G00010 | 1 | |
Tree-based ortholog | many-to-many | HV1569342G00010 HV138106G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA08G30350 | 1 | |
Tree-based ortholog | many-to-1 | MA08G30350 | 1 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G68550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G68620 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_01G68620 OSINDICA_01G68630 OSINDICA_01G68550 | 3 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G72240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G72240 | 1 | ||
Tree-based ortholog | many-to-many | OS01G72240 OS01G72250 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL03G01160 OL03G01170 | 2 | |
Tree-based ortholog | many-to-many | OL03G01160 OL03G01170 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00142G00510 PP00025G01770 | 2 | |
Tree-based ortholog | many-to-many | PP00142G00510 PP00025G01770 | 2 | ||
Setaria italica | Anchor point | 1-to-1 | SI005G46640 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G46650 | 1 | ||
Tree-based ortholog | many-to-1 | SI005G46650 | 1 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G068830 | 1 | |
Tree-based ortholog | many-to-1 | SL11G068830 | 1 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB03G045930 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G045930 | 1 | ||
Tree-based ortholog | many-to-many | SB06G011762 SB01G031695 SB07G024275 ... | 5 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV13G00110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G00110 | 1 | ||
Tree-based ortholog | many-to-many | VV13G00140 VV13G00110 | 2 | ||
Zea mays | Anchor point | 1-to-1 | ZM03G20830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G27760 | 1 | ||
Tree-based ortholog | many-to-many | ZM08G27760 ZM03G20840 ZM03G20830 | 3 |