Integrative Orthology Viewer: PT01G00570 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT01G00570 | 1 | |
Anchor point | PT03G21890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | PT03G21890 PT03G21940 PT01G00590 ... | 4 | ||
Tree-based ortholog | PT01G00570 PT03G21890 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G25650 | 1 | |
Tree-based ortholog | many-to-1 | AT4G25650 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G04810 | 1 | |
Tree-based ortholog | many-to-1 | BD1G04810 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00119G00560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00119G00570 CP00119G00560 | 2 | ||
Tree-based ortholog | many-to-many | CP00119G00570 CP00119G00560 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR06G08030 CR17G06300 CR17G06320 | 3 | |
Tree-based ortholog | many-to-1 | CR10G07130 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV40587G00010 | 1 | |
Tree-based ortholog | many-to-many | HV40587G00010 HV59965G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA02G12590 | 1 | |
Tree-based ortholog | many-to-1 | MA02G12590 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G56490 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_03G56510 OSINDICA_03G56520 OSINDICA_04G35670 ... | 6 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G59110 | 1 | |
Tree-based ortholog | many-to-many | OS03G59110 OS03G59120 OS03G59152 ... | 4 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL14G00340 | 1 | |
Tree-based ortholog | many-to-1 | OL14G00340 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00007G02200 | 1 | |
Tree-based ortholog | many-to-1 | PP00007G02200 | 1 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G04450 | 1 | |
Tree-based ortholog | many-to-many | SI009G04450 SI009G04440 | 2 | ||
Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G040160 | 1 | |
Tree-based ortholog | many-to-1 | SL04G040160 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G004440 | 1 | |
Tree-based ortholog | many-to-many | SB01G004440 SB01G004450 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV06G07460 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G07450 | 1 | ||
Tree-based ortholog | many-to-1 | VV06G07460 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM01G56760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G56760 | 1 | ||
Tree-based ortholog | many-to-1 | ZM01G56760 | 1 |