Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00421G00030
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Orthologous gene family | PP00025G00300 PP00306G00520 PP00421G00030 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | PP00306G00520 PP00025G00300 PP00421G00030 ... | 4 | ||
| Tree-based ortholog | PP00060G00290 PP00306G00520 PP00421G00030 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G50820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT3G50820 AT5G66570 | 2 | ||
| Tree-based ortholog | many-to-many | AT4G37230 AT3G50820 AT5G66570 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G56580 | 1 | |
| Tree-based ortholog | many-to-1 | BD1G56580 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00015G00810 | 1 | |
| Tree-based ortholog | many-to-1 | CP00015G00810 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G07240 | 1 | |
| Tree-based ortholog | many-to-1 | CR09G07240 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV81207G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV81207G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA00G20710 | 1 | |
| Tree-based ortholog | many-to-1 | MA00G20710 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_01G29140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G29140 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_01G29140 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G31690 | 1 | |
| Tree-based ortholog | many-to-1 | OS01G31690 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G00150 | 1 | |
| Tree-based ortholog | many-to-1 | OL20G00150 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT07G03370 PT05G13040 | 2 | |
| Tree-based ortholog | many-to-many | PT05G13040 PT07G03370 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G17440 | 1 | |
| Tree-based ortholog | many-to-1 | SI005G17440 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G065400 SL02G090030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL02G090030 SL02G065400 | 2 | ||
| Tree-based ortholog | many-to-many | SL07G032620 SL07G032610 SL07G032640 ... | 7 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G08160 | 1 | |
| Tree-based ortholog | many-to-1 | VV18G08160 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G13930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM06G11130 ZM05G13930 | 2 | ||
| Tree-based ortholog | many-to-many | ZM06G11130 ZM05G13930 | 2 |