Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00298G00280
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Orthologous gene family | PP00111G00160 PP00149G00370 PP00209G00110 ... | 4 |  |
| Best-Hits-and-Inparalogs(BHI)family | PP00123G00750 PP00074G01170 PP00209G00140 ... | 15 | ||
| Tree-based ortholog | PP00149G00370 PP00298G00280 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G15710 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G27340 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G25490 | 1 | |
| Tree-based ortholog | many-to-1 | BD2G59200 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01627G00010 | 1 | |
| Tree-based ortholog | many-to-1 | CP00010G02040 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV57556G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV57556G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA00G00900 | 1 | |
| Tree-based ortholog | many-to-many | MA00G00900 MA05G10110 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G66140 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_01G66140 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G57290 | 1 | |
| Tree-based ortholog | many-to-1 | OS01G69940 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G11240 PT17G10230 | 2 | |
| Tree-based ortholog | many-to-many | PT01G05710 PT03G17130 PT03G06200 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G03140 | 1 | |
| Tree-based ortholog | many-to-1 | SI005G44470 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G089310 | 1 | |
| Tree-based ortholog | many-to-many | SL05G015520 SL03G116480 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G044270 | 1 | |
| Tree-based ortholog | many-to-1 | SB03G044270 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G15890 | 1 | |
| Tree-based ortholog | many-to-1 | VV01G04850 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G25980 | 1 | |
| Tree-based ortholog | many-to-many | ZM08G28780 ZM03G22570 | 2 |