Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00013G01050
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Orthologous gene family | PP00013G01050 PP00158G00010 PP00315G00140 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | PP00315G00140 PP00158G00010 PP00013G01050 | 3 | ||
| Tree-based ortholog | PP00013G01050 PP00315G00140 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G31860 | 1 | |
| Tree-based ortholog | many-to-1 | AT4G27800 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD4G37710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G31080 | 1 | ||
| Tree-based ortholog | many-to-1 | BD4G37710 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00148G00200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00148G00200 | 1 | ||
| Tree-based ortholog | many-to-many | CP00148G00200 CP00010G00440 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G10440 | 1 | |
| Tree-based ortholog | many-to-many | CR16G05570 CR03G09990 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV128387G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV63050G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA04G13220 | 1 | |
| Tree-based ortholog | many-to-1 | MA06G04080 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G40060 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_04G34360 OSINDICA_02G38150 OSINDICA_02G38140 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G08364 OS06G44210 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G08364 | 1 | ||
| Tree-based ortholog | many-to-many | OS02G08364 OS06G44210 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL09G03460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G03460 | 1 | ||
| Tree-based ortholog | many-to-1 | OL09G03460 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G04300 PT03G18380 PT06G26510 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT06G26510 | 1 | ||
| Tree-based ortholog | many-to-many | PT01G04300 PT03G18380 PT06G26510 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G19900 | 1 | |
| Tree-based ortholog | many-to-many | SI002G31250 SI001G06630 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G006060 | 1 | |
| Tree-based ortholog | many-to-many | SL12G096520 SL01G087460 SL07G053760 ... | 8 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | SB04G005450 SB10G025800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G025800 | 1 | ||
| Tree-based ortholog | many-to-many | SB04G005450 SB10G025800 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV04G13210 | 1 | |
| Tree-based ortholog | many-to-many | VV16G09200 VV17G06540 | 2 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G21240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM09G16000 ZM09G16020 | 2 | ||
| Tree-based ortholog | many-to-many | ZM05G21240 ZM09G15990 | 2 |