Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PP00009G00180
(Physcomitrella patens)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Physcomitrella patens | Orthologous gene family | PP00009G00180 PP00049G00170 PP00212G00160 | 3 |  |
| Anchor point | PP00049G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PP00212G00160 PP00049G00170 PP00009G00180 | 3 | ||
| Tree-based ortholog | PP00049G00170 PP00009G00180 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G01150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G01150 | 1 | ||
| Tree-based ortholog | many-to-1 | AT4G01150 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD1G43950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G43950 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G43950 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00184G00030 | 1 | |
| Tree-based ortholog | many-to-1 | CP00184G00030 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR05G00160 | 1 | |
| Tree-based ortholog | many-to-1 | CR05G00160 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV276690G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV276690G00010 | 1 | ||
| Tree-based ortholog | many-to-many | HV137288G00020 HV276690G00010 | 2 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MA07G19170 MA10G30780 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G19170 MA03G20840 | 2 | ||
| Tree-based ortholog | many-to-many | MA03G20840 MA07G19170 MA10G30780 | 3 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_02G48100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G14590 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_06G14590 OSINDICA_02G48100 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G15400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G15400 | 1 | ||
| Tree-based ortholog | many-to-many | OS06G15400 OS02G49870 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL08G02820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G02820 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT02G16680 | 1 | |
| Tree-based ortholog | many-to-many | PT02G16680 PT14G09390 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI001G32040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G32040 | 1 | ||
| Tree-based ortholog | many-to-many | SI001G32040 SI004G11900 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G095430 SL10G011770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G011770 SL01G095430 | 2 | ||
| Tree-based ortholog | many-to-many | SL01G095430 SL10G011770 | 2 | ||
| Sorghum bicolor | Orthologous gene family | many-to-1 | SB10G009560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G009560 | 1 | ||
| Tree-based ortholog | many-to-1 | SB10G009560 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV16G07090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G05850 | 1 | ||
| Tree-based ortholog | many-to-many | VV16G07090 VV15G05850 | 2 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G01830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G01830 ZM06G17460 | 2 | ||
| Tree-based ortholog | many-to-many | ZM04G23990 ZM06G17460 ZM01G01830 | 3 |