Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OSINDICA_08G03170
(Oryza sativa ssp. indica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | OSINDICA_08G03170 | 1 |  |
| Tree-based ortholog | OSINDICA_08G03170 | 1 | ||
| Orthologous gene family | OSINDICA_02G43620 OSINDICA_04G40270 OSINDICA_04G45710 ... | 6 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G05230 | 1 | |
| Tree-based ortholog | 1-to-many | AT4G04890 AT4G21750 | 2 | ||
| Orthologous gene family | many-to-many | AT1G05230 AT4G00730 AT4G04890 ... | 4 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G15327 | 1 | |
| Tree-based ortholog | 1-to-1 | BD3G14500 | 1 | ||
| Orthologous gene family | many-to-many | BD3G57567 BD4G35760 BD5G22570 | 3 | ||
| Anchor point | N/A | BD3G14500 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G02160 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00008G02160 | 1 | ||
| Orthologous gene family | many-to-many | CP00007G01380 CP00090G00050 CP00098G00020 ... | 5 | ||
| Anchor point | N/A | CP00008G02140 CP00097G00470 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV37438G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV37438G00010 | 1 | ||
| Orthologous gene family | many-to-many | HV37272G00010 HV37438G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA11G26620 MA08G07570 | 2 | |
| Tree-based ortholog | 1-to-many | MA10G04980 MA03G23700 MA11G26620 ... | 4 | ||
| Orthologous gene family | many-to-many | MA02G15460 MA03G12680 MA05G10740 ... | 9 | ||
| Anchor point | N/A | MA03G23700 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G04190 | 1 | |
| Tree-based ortholog | 1-to-1 | OS08G04190 | 1 | ||
| Orthologous gene family | many-to-many | OS02G45250 OS04G53540 OS06G10600 ... | 4 | ||
| Anchor point | N/A | OS08G04190 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00059G00720 PP00084G01160 PP00173G00480 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00173G00480 PP00209G00060 PP00084G01160 ... | 4 | ||
| Orthologous gene family | many-to-many | PP00059G00720 PP00084G01160 PP00173G00480 | 3 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G23020 PT14G15200 | 2 | |
| Tree-based ortholog | 1-to-many | PT11G02500 PT04G02040 | 2 | ||
| Orthologous gene family | many-to-many | PT01G13780 PT01G18410 PT12G03850 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI006G07110 | 1 | |
| Tree-based ortholog | 1-to-1 | SI006G07110 | 1 | ||
| Orthologous gene family | many-to-many | SI005G08090 SI009G32000 | 2 | ||
| Anchor point | N/A | SI006G07110 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G005330 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G031760 | 1 | ||
| Orthologous gene family | many-to-many | SL07G041850 SL10G005330 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB07G002780 | 1 | |
| Tree-based ortholog | 1-to-1 | SB07G002780 | 1 | ||
| Orthologous gene family | many-to-many | SB01G028160 SB02G030470 SB03G008090 ... | 6 | ||
| Anchor point | N/A | SB07G002780 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G12230 | 1 | |
| Tree-based ortholog | 1-to-1 | VV10G00420 | 1 | ||
| Orthologous gene family | many-to-many | VV02G01740 VV15G07980 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G11230 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM10G11230 | 1 | ||
| Orthologous gene family | many-to-many | ZM02G03810 ZM03G06790 ZM09G01790 ... | 4 | ||
| Anchor point | N/A | ZM10G11230 | 1 |