Integrative Orthology Viewer: OSINDICA_05G26660 (Oryza sativa ssp. indica)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Oryza sativa ssp. indica | Orthologous gene family | OSINDICA_05G26660 | 1 | |
Anchor point | OSINDICA_01G66800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | OSINDICA_05G26660 | 1 | ||
Tree-based ortholog | OSINDICA_05G28510 OSINDICA_05G26660 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G02850 | 1 | |
Tree-based ortholog | many-to-many | AT3G62740 AT3G62750 AT4G27830 ... | 11 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD2G27770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BD3G45627 BD3G45650 BD3G45607 | 3 | ||
Tree-based ortholog | many-to-many | BD2G27770 BD3G45640 BD3G45627 ... | 7 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00009G02250 CP25278G00030 | 2 | |
Tree-based ortholog | many-to-many | CP00009G02250 CP25278G00030 | 2 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR03G06580 CR07G01960 | 2 | |
Tree-based ortholog | many-to-many | CR03G06580 CR07G01960 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | HV135723G00010 HV134946G00010 | 2 | |
Tree-based ortholog | many-to-many | HV1564701G00010 HV134946G00010 HV135723G00010 ... | 6 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA09G16850 MA11G05680 MA09G16800 ... | 4 | |
Tree-based ortholog | many-to-many | MA09G16850 MA09G16800 MA11G05670 ... | 5 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS05G30250 OS01G70520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G30250 | 1 | ||
Tree-based ortholog | many-to-1 | OS05G30250 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G02150 | 1 | |
Tree-based ortholog | many-to-1 | OL11G02150 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00114G00740 PP00001G03190 PP00137G00190 ... | 4 | |
Tree-based ortholog | many-to-many | PP00114G00740 PP00009G00390 PP00137G00190 ... | 10 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G22740 PT01G22730 | 2 | |
Tree-based ortholog | many-to-1 | PT11G13020 | 1 | ||
Setaria italica | Anchor point | 1-to-1 | SI003G27440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G27460 | 1 | ||
Tree-based ortholog | many-to-1 | SI003G27460 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL09G075060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL09G075070 SL09G075060 | 2 | ||
Tree-based ortholog | many-to-many | SL01G081160 SL09G075060 SL08G042020 ... | 4 | ||
Sorghum bicolor | Anchor point | 1-to-1 | SB09G018145 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB09G018160 | 1 | ||
Tree-based ortholog | many-to-1 | SB09G018145 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV07G08330 VV07G08310 | 2 | |
Tree-based ortholog | many-to-1 | VV13G07260 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM06G22010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G28870 | 1 | ||
Tree-based ortholog | many-to-many | ZM06G22010 ZM03G28870 | 2 |