Integrative Orthology Viewer: OSINDICA_04G40140 (Oryza sativa ssp. indica)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Oryza sativa ssp. indica | Orthologous gene family | OSINDICA_02G43490 OSINDICA_04G40140 | 2 | |
Anchor point | OSINDICA_02G43470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | OSINDICA_04G40140 | 1 | ||
Tree-based ortholog | OSINDICA_04G40140 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G00910 | 1 | |
Tree-based ortholog | 1-to-1 | AT4G00910 | 1 | ||
Brachypodium distachyon | Anchor point | 1-to-many | BD5G18622 BD3G51470 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G18622 | 1 | ||
Tree-based ortholog | 1-to-1 | BD5G18622 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00096G00600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00096G00600 | 1 | ||
Tree-based ortholog | 1-to-many | CP00096G00600 CP00175G00020 | 2 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV53617G00010 | 1 | |
Tree-based ortholog | 1-to-1 | HV53617G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA00G22280 | 1 | |
Tree-based ortholog | 1-to-many | MA02G10150 MA00G22280 | 2 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS04G47930 OS02G45150 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G47930 | 1 | ||
Tree-based ortholog | 1-to-1 | OS04G47930 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00072G01010 PP00068G00650 PP00087G00390 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00005G00800 PP00087G00390 PP00068G00650 ... | 5 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G08590 PT03G14500 | 2 | |
Tree-based ortholog | 1-to-many | PT02G17460 PT14G10120 PT01G08590 ... | 4 | ||
Setaria italica | Anchor point | 1-to-many | SI007G20790 SI001G28050 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI007G20790 | 1 | ||
Tree-based ortholog | 1-to-1 | SI007G20790 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G096140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G096140 | 1 | ||
Tree-based ortholog | 1-to-many | SL01G096140 SL08G082950 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-1 | SB04G032070 | 1 | |
Anchor point | 1-to-many | SB04G032070 SB06G025640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G025640 | 1 | ||
Tree-based ortholog | 1-to-1 | SB06G025640 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G07010 | 1 | |
Tree-based ortholog | 1-to-many | VV15G07010 VV02G05410 | 2 | ||
Zea mays | Anchor point | 1-to-many | ZM05G36250 ZM10G22190 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G22190 | 1 | ||
Tree-based ortholog | 1-to-1 | ZM10G22190 | 1 |