Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OSINDICA_04G21940
(Oryza sativa ssp. indica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. indica | Orthologous gene family | OSINDICA_00G09730 OSINDICA_00G15210 OSINDICA_00G28270 ... | 8 |  |
| Best-Hits-and-Inparalogs(BHI)family | OSINDICA_00G22980 OSINDICA_00G00270 OSINDICA_00G00380 ... | 11 | ||
| Tree-based ortholog | OSINDICA_00G17400 OSINDICA_00G00270 OSINDICA_04G21940 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT3G14420 AT4G18360 | 2 | |
| Tree-based ortholog | many-to-many | AT3G14420 AT3G14415 AT4G18360 ... | 5 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G20870 | 1 | |
| Tree-based ortholog | many-to-many | BD1G06430 BD1G58480 BD5G22250 ... | 4 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00017G00090 | 1 | |
| Tree-based ortholog | many-to-many | CP00077G01050 CP00017G00090 CP00025G01500 | 3 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G06640 | 1 | |
| Tree-based ortholog | many-to-1 | CR03G06640 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV6695G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV6695G00010 HV1572170G00010 HV46080G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G08080 MA06G20450 | 2 | |
| Tree-based ortholog | many-to-many | MA07G01220 MA07G08080 MA04G23540 ... | 6 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G57220 | 1 | |
| Tree-based ortholog | many-to-many | OS03G57220 OS07G05820 OS08G09860 ... | 5 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL16G02620 | 1 | |
| Tree-based ortholog | many-to-1 | OL16G02620 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00033G00970 PP00109G00730 PP00012G00990 | 3 | |
| Tree-based ortholog | many-to-many | PP00109G00730 PP00033G00970 PP00012G00990 ... | 5 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G06520 PT11G11270 PT01G39440 | 3 | |
| Tree-based ortholog | many-to-many | PT11G11270 PT01G39440 PT04G06520 ... | 6 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G06280 | 1 | |
| Tree-based ortholog | many-to-many | SI009G06280 SI002G03350 SI007G25080 ... | 6 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G048250 | 1 | |
| Tree-based ortholog | many-to-many | SL07G056540 SL08G048250 SL10G007600 ... | 7 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G028990 | 1 | |
| Tree-based ortholog | many-to-many | SB01G005960 SB06G028990 SB06G029000 ... | 5 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV10G04530 | 1 | |
| Tree-based ortholog | many-to-many | VV19G11950 VV10G04530 VV09G02060 ... | 4 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G01830 | 1 | |
| Tree-based ortholog | many-to-many | ZM07G01830 ZM02G04070 ZM02G04060 | 3 |