Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OSINDICA_01G67090
(Oryza sativa ssp. indica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. indica | Orthologous gene family | OSINDICA_01G67090 | 1 |  |
| Anchor point | OSINDICA_03G21720 OSINDICA_07G39300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | OSINDICA_01G67090 | 1 | ||
| Tree-based ortholog | OSINDICA_01G67090 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G31380 | 1 | |
| Tree-based ortholog | 1-to-many | AT5G24860 AT4G31380 | 2 | ||
| Brachypodium distachyon | Anchor point | many-to-many | BD2G59820 BD1G18240 BD1G62655 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G59820 | 1 | ||
| Tree-based ortholog | 1-to-many | BD2G59830 BD2G59820 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP47211G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CP01312G00010 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV84209G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV60510G00020 HV60510G00010 HV235676G00010 ... | 4 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA11G16260 MA08G30980 MA02G00880 | 3 | |
| Tree-based ortholog | 1-to-many | MA02G00880 MA11G16260 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS07G47450 OS01G70730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G70730 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS01G70730 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00167G00070 PP00299G00320 PP00003G00150 | 3 | |
| Populus trichocarpa | Anchor point | many-to-1 | PT10G02450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G20930 PT10G02450 | 2 | ||
| Tree-based ortholog | 1-to-1 | PT06G27610 | 1 | ||
| Setaria italica | Anchor point | many-to-many | SI005G45370 SI002G43680 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G45370 | 1 | ||
| Tree-based ortholog | 1-to-many | SI008G09210 SI008G09230 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-1 | SL01G066950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL01G066980 SL01G066970 SL01G066950 | 3 | ||
| Tree-based ortholog | 1-to-many | SL01G066970 SL01G066950 SL01G066980 | 3 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB03G044960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G044960 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB03G044960 | 1 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV05G03040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G03040 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV05G03040 | 1 | ||
| Zea mays | Anchor point | many-to-many | ZM02G40610 ZM03G21920 ZM07G29830 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G21920 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM07G29830 | 1 |