Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
OS03G15020
(Oryza sativa ssp. japonica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Oryza sativa ssp. japonica | Orthologous gene family | OS01G39830 OS02G12730 OS03G06940 ... | 9 |  |
| Best-Hits-and-Inparalogs(BHI)family | OS03G15020 | 1 | ||
| Tree-based ortholog | OS03G15020 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G45130 AT2G28470 AT2G32810 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G28470 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT2G32810 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G74050 BD2G24670 BD2G40450 ... | 8 | |
| Anchor point | N/A | BD1G67760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G67760 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD1G67760 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00024G00230 CP00025G00590 CP00028G00010 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00216G00200 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00083G00280 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-many | HV244240G00010 HV2547454G00010 HV368851G00010 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV40811G00020 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV40811G00020 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MA01G27550 MA02G17150 MA02G22370 ... | 12 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA04G21440 | 1 | ||
| Tree-based ortholog | 1-to-1 | MA04G21440 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G62100 OSINDICA_02G11790 OSINDICA_06G38170 ... | 5 | |
| Anchor point | N/A | OSINDICA_03G13370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G13370 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_03G13370 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G05040 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00770 PP00189G00400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00010G00770 PP00189G00400 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00010G00770 PP00189G00400 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04060 PT01G02570 PT01G02580 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G01240 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT17G05790 | 1 | ||
| Setaria italica | Orthologous gene family | many-to-many | SI001G03510 SI003G31090 SI004G24120 ... | 8 | |
| Anchor point | N/A | SI009G48000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G48000 | 1 | ||
| Tree-based ortholog | 1-to-1 | SI009G48000 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G110000 SL04G080840 SL10G055470 ... | 6 | |
| Anchor point | N/A | SL10G055470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G069270 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL09G092160 | 1 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | SB01G040750 SB02G031260 SB03G025990 ... | 6 | |
| Anchor point | N/A | SB01G040750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G040750 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB01G040750 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G01310 VV06G05220 VV11G02200 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G05220 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV05G06980 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G36930 ZM02G34330 ZM03G25370 ... | 7 | |
| Anchor point | N/A | ZM01G10060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G10060 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM01G10060 | 1 |