Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
MA10G06110
(Musa acuminata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Musa acuminata | Orthologous gene family | MA01G27050 MA07G05310 MA10G06110 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | MA07G05310 MA10G06110 | 2 | ||
| Tree-based ortholog | MA07G05310 MA03G13670 MA01G27050 ... | 5 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G25220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G25220 AT5G11060 | 2 | ||
| Tree-based ortholog | many-to-1 | AT5G11060 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD3G19927 | 1 | |
| Anchor point | N/A | BD1G30730 BD3G06170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G19927 | 1 | ||
| Tree-based ortholog | many-to-many | BD3G19927 BD3G06170 BD1G30730 | 3 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00187G00280 | 1 | |
| Tree-based ortholog | many-to-1 | CP00046G00920 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR08G04920 | 1 | |
| Tree-based ortholog | many-to-1 | CR08G04920 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV45948G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV45948G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | HV45948G00010 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_06G39660 OSINDICA_02G08360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G39660 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_08G18720 OSINDICA_02G08360 OSINDICA_06G39660 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS02G08544 OS06G43860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G19650 | 1 | ||
| Tree-based ortholog | many-to-many | OS08G19650 OS02G08544 OS06G43860 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G04210 | 1 | |
| Tree-based ortholog | many-to-1 | OL04G04210 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00154G00500 PP00077G00320 | 2 | |
| Tree-based ortholog | many-to-many | PP00077G00320 PP00154G00500 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT06G25940 PT18G02270 | 2 | |
| Tree-based ortholog | many-to-many | PT18G11410 PT06G19000 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI001G06390 | 1 | |
| Anchor point | N/A | SI004G20380 SI001G06390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G06390 | 1 | ||
| Tree-based ortholog | many-to-many | SI006G10720 SI001G06390 SI004G20380 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G041820 | 1 | |
| Tree-based ortholog | many-to-many | SL07G007120 SL12G010410 | 2 | ||
| Sorghum bicolor | Anchor point | N/A | SB04G005620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB04G005620 | 1 | ||
| Tree-based ortholog | many-to-1 | SB04G005620 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G01750 | 1 | |
| Tree-based ortholog | many-to-1 | VV11G01750 | 1 | ||
| Zea mays | Anchor point | N/A | ZM05G21500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G21500 | 1 | ||
| Tree-based ortholog | many-to-many | ZM05G21500 ZM04G38790 ZM09G14230 | 3 |