Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP01208G00010
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00023G00880 CP00062G01160 CP01208G00010 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | CP01208G00010 | 1 | ||
| Tree-based ortholog | CP01208G00010 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G16120 AT2G16130 AT3G18830 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G36670 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT4G36670 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G23450 | 1 | |
| Tree-based ortholog | 1-to-many | BD5G26270 BD5G16480 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G12890 | 1 | |
| Tree-based ortholog | 1-to-1 | CR17G10000 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-many | HV101937G00010 HV138553G00010 HV54715G00010 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV54715G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV54715G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA01G23570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G14460 MA07G26550 | 2 | ||
| Tree-based ortholog | 1-to-many | MA04G07190 MA04G14450 | 2 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G69950 OSINDICA_07G31650 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_07G31640 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_10G13280 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G21590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G21590 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS10G21590 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G01710 | 1 | |
| Tree-based ortholog | 1-to-many | OL09G01830 OL06G04500 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00017G01630 | 1 | |
| Tree-based ortholog | 1-to-many | PP00159G00010 PP00129G00340 PP00199G00040 ... | 9 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G02790 | 1 | |
| Tree-based ortholog | 1-to-1 | PT04G03910 | 1 | ||
| Setaria italica | Orthologous gene family | many-to-many | SI002G37710 SI002G37720 SI008G09180 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G27970 | 1 | ||
| Tree-based ortholog | 1-to-many | SI009G27970 SI009G27980 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G109460 SL02G062860 SL02G062870 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL02G062870 SL02G062860 SL02G062890 | 3 | ||
| Tree-based ortholog | 1-to-many | SL02G062870 SL02G062860 | 2 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | SB02G037580 SB02G037590 SB09G007450 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G031360 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB09G022100 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G05190 | 1 | |
| Tree-based ortholog | 1-to-1 | VV03G08210 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G25230 ZM07G25480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G25230 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM01G25230 | 1 |