Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00160G00090
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00160G00090 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | CP00160G00090 | 1 | ||
| Tree-based ortholog | CP00160G00090 CP00129G00410 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT1G50010 AT1G04820 AT4G14960 | 3 | |
| Tree-based ortholog | many-to-many | AT1G04820 AT1G50010 AT4G14960 | 3 | ||
| Brachypodium distachyon | Anchor point | N/A | BD1G10150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G10150 | 1 | ||
| Tree-based ortholog | many-to-many | BD1G07160 BD1G10150 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR04G00210 CR03G10780 | 2 | |
| Tree-based ortholog | many-to-many | CR04G00210 CR03G10780 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV57177G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV37796G00010 HV138615G00010 HV57177G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA02G12600 | 1 | |
| Tree-based ortholog | many-to-many | MA06G30440 MA08G15880 MA07G08300 ... | 5 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G49910 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_03G49910 OSINDICA_11G10920 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS03G51600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G51600 | 1 | ||
| Tree-based ortholog | many-to-many | OS11G14220 OS03G51600 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL12G01340 OL08G03660 | 2 | |
| Tree-based ortholog | many-to-many | OL12G01340 OL08G03660 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00070G00900 | 1 | |
| Tree-based ortholog | many-to-1 | PP00070G00900 | 1 | ||
| Populus trichocarpa | Anchor point | N/A | PT02G11190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G11190 | 1 | ||
| Tree-based ortholog | many-to-1 | PT02G11190 | 1 | ||
| Setaria italica | Anchor point | N/A | SI009G11000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G11000 | 1 | ||
| Tree-based ortholog | many-to-many | SI009G07140 SI009G11000 | 2 | ||
| Solanum lycopersicum | Anchor point | N/A | SL12G088180 SL04G077020 SL02G091870 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G087880 | 1 | ||
| Tree-based ortholog | many-to-many | SL06G031660 SL04G077020 SL02G087880 ... | 6 | ||
| Sorghum bicolor | Anchor point | N/A | SB01G009570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G006650 | 1 | ||
| Tree-based ortholog | many-to-many | SB09G021020 SB01G009570 SB01G006650 | 3 | ||
| Vitis vinifera | Anchor point | N/A | VV18G05240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G08540 | 1 | ||
| Tree-based ortholog | many-to-many | VV03G09220 VV18G05240 | 2 | ||
| Zea mays | Anchor point | N/A | ZM01G51400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G04960 | 1 | ||
| Tree-based ortholog | many-to-many | ZM03G41700 ZM01G03310 ZM08G21990 ... | 7 |