Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00139G00140
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00139G00140 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | CP00139G00140 CP00336G00020 | 2 | ||
| Tree-based ortholog | CP00139G00140 CP00139G00150 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | N/A | AT2G29130 AT5G60020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G60020 | 1 | ||
| Tree-based ortholog | many-to-1 | AT5G60020 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G54680 | 1 | |
| Tree-based ortholog | many-to-many | BD2G23350 BD2G54690 BD2G54680 ... | 5 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G06860 | 1 | |
| Tree-based ortholog | many-to-many | CR01G06860 CR03G04690 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV282961G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV57132G00010 HV45263G00010 HV282961G00010 ... | 6 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA09G03460 | 1 | |
| Tree-based ortholog | many-to-many | MA09G29080 MA06G05120 MA02G16750 ... | 4 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G59220 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_04G21680 OSINDICA_01G59220 OSINDICA_01G59150 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G62490 | 1 | |
| Tree-based ortholog | many-to-many | OS05G38410 OS05G38420 OS01G62490 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00077G00890 | 1 | |
| Tree-based ortholog | many-to-many | PP00077G00890 PP00206G00320 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT01G34160 PT01G40110 PT11G12030 ... | 6 | |
| Tree-based ortholog | many-to-many | PT11G12030 PT11G12020 PT01G40110 ... | 4 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G38600 | 1 | |
| Tree-based ortholog | many-to-many | SI003G22090 SI005G38610 SI005G38600 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G011960 | 1 | |
| Tree-based ortholog | many-to-many | SL09G011000 SL09G011050 SL09G011960 | 3 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G039530 | 1 | |
| Tree-based ortholog | many-to-many | SB09G022510 SB03G039530 SB03G039520 | 3 | ||
| Vitis vinifera | Anchor point | N/A | VV06G04490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV06G04240 VV06G04490 | 2 | ||
| Tree-based ortholog | many-to-many | VV06G04240 VV06G04490 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G27210 | 1 | |
| Tree-based ortholog | many-to-many | ZM03G27210 ZM03G27220 ZM01G48750 ... | 4 |