Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00114G00230
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | CP00114G00230 | 1 |  |
| Tree-based ortholog | CP00114G00370 CP00114G00230 | 2 | ||
| Orthologous gene family | CP00114G00230 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G02960 | 1 | |
| Tree-based ortholog | many-to-many | AT3G09680 AT5G02960 | 2 | ||
| Anchor point | N/A | AT3G09680 AT5G02960 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BD2G54210 BD2G22897 | 2 | |
| Tree-based ortholog | many-to-many | BD2G22897 BD2G54210 | 2 | ||
| Orthologous gene family | 1-to-many | BD2G22897 BD2G54210 | 2 | ||
| Anchor point | N/A | BD2G22897 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G04740 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G04740 | 1 | ||
| Orthologous gene family | 1-to-1 | CR12G04740 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | HV81969G00010 HV162791G00010 HV67389G00010 | 3 | |
| Tree-based ortholog | many-to-many | HV67389G00010 HV81969G00010 HV162791G00010 | 3 | ||
| Orthologous gene family | 1-to-many | HV162791G00010 HV67389G00010 HV81969G00010 | 3 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA05G15250 MA03G01180 MA02G23610 ... | 4 | |
| Tree-based ortholog | many-to-1 | MA04G17680 | 1 | ||
| Orthologous gene family | 1-to-many | MA02G23610 MA05G15250 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OSINDICA_03G57640 OSINDICA_01G58510 | 2 | |
| Tree-based ortholog | many-to-1 | OSINDICA_10G12840 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G60400 | 1 | |
| Tree-based ortholog | many-to-1 | OS10G20990 | 1 | ||
| Orthologous gene family | 1-to-1 | OS03G60400 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G01790 | 1 | |
| Tree-based ortholog | many-to-1 | OL06G01790 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00287G00080 PP00061G01140 PP00264G00230 ... | 5 | |
| Tree-based ortholog | many-to-many | PP00019G00620 PP00061G01140 PP00135G00170 ... | 6 | ||
| Orthologous gene family | 1-to-many | PP00061G01140 PP00135G00170 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G21710 PT08G04440 | 2 | |
| Tree-based ortholog | many-to-1 | PT16G08580 | 1 | ||
| Anchor point | N/A | PT10G21710 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SI003G21640 SI009G03480 SI005G37980 | 3 | |
| Tree-based ortholog | many-to-many | SI003G21640 SI005G37980 SI009G03480 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL09G007350 SL10G084310 SL10G086020 | 3 | |
| Tree-based ortholog | many-to-many | SL10G084310 SL09G007350 SL10G086020 | 3 | ||
| Anchor point | N/A | SL10G086020 SL10G084310 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SB01G003410 SB09G022840 SB03G039010 | 3 | |
| Tree-based ortholog | many-to-many | SB01G003410 SB03G039010 SB09G022840 | 3 | ||
| Orthologous gene family | 1-to-many | SB03G039010 SB09G022840 | 2 | ||
| Anchor point | N/A | SB09G022840 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV13G03700 VV08G02430 | 2 | |
| Tree-based ortholog | many-to-many | VV06G04810 VV13G03700 VV08G02430 | 3 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G57710 ZM03G27750 ZM08G17860 ... | 4 | |
| Tree-based ortholog | many-to-many | ZM06G08750 ZM01G07330 ZM03G38680 | 3 | ||
| Orthologous gene family | 1-to-many | ZM01G57710 ZM03G27750 ZM06G25970 ... | 4 | ||
| Anchor point | N/A | ZM06G25970 | 1 |