Integrative Orthology Viewer: CP00056G00740 (Carica papaya)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Carica papaya | Orthologous gene family | CP00056G00740 | 1 | |
Anchor point | CP00112G00880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CP00074G00110 CP00056G00740 | 2 | ||
Tree-based ortholog | CP00056G00740 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT2G29550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G23860 | 1 | ||
Tree-based ortholog | 1-to-1 | AT5G23860 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G78210 | 1 | |
Tree-based ortholog | 1-to-1 | BD1G13090 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR12G15170 CR12G16830 | 2 | |
Tree-based ortholog | 1-to-many | CR12G15170 CR12G16830 CR04G00210 ... | 8 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV438357G00010 | 1 | |
Tree-based ortholog | 1-to-1 | HV438357G00010 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA04G12390 | 1 | |
Tree-based ortholog | 1-to-many | MA01G18000 MA05G22290 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G00620 | 1 | |
Tree-based ortholog | 1-to-1 | OSINDICA_01G56050 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G01530 | 1 | |
Tree-based ortholog | 1-to-1 | OS01G59150 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G04460 | 1 | |
Tree-based ortholog | 1-to-many | OL01G02190 OL01G04460 OL12G01340 ... | 6 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00252G00310 PP00093G00690 PP00218G00030 ... | 6 | |
Tree-based ortholog | 1-to-many | PP00252G00350 PP00093G00830 PP00218G00030 ... | 29 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT16G10730 PT09G04020 PT06G09500 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT01G10610 | 1 | ||
Tree-based ortholog | 1-to-1 | PT06G09500 | 1 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI009G59590 | 1 | |
Tree-based ortholog | 1-to-many | SI009G59590 SI005G36070 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL10G085020 SL10G086760 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G085020 SL10G086760 | 2 | ||
Tree-based ortholog | 1-to-1 | SL06G035970 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G050310 | 1 | |
Tree-based ortholog | 1-to-many | SB01G050310 SB03G037490 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV06G02480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV02G06500 | 1 | ||
Tree-based ortholog | 1-to-1 | VV16G08630 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G00500 | 1 | |
Tree-based ortholog | 1-to-many | ZM03G29180 ZM01G00500 | 2 |