Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00021G01550
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00021G01550 | 1 |  |
| Anchor point | CP00200G00160 CP00055G00990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00021G01550 | 1 | ||
| Tree-based ortholog | CP00021G01550 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G43060 AT1G47128 | 2 | |
| Tree-based ortholog | 1-to-many | AT1G47128 AT5G43060 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G24027 | 1 | |
| Tree-based ortholog | 1-to-1 | BD5G25637 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G09790 | 1 | |
| Tree-based ortholog | 1-to-many | CR07G05150 CR08G00130 CR08G06090 ... | 11 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV98659G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV6586G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G13350 MA04G06280 MA01G16580 ... | 5 | |
| Tree-based ortholog | 1-to-many | MA04G06280 MA04G13350 MA01G10120 ... | 6 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_04G47760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G47760 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_04G49580 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-1 | OS04G55650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G57440 | 1 | ||
| Tree-based ortholog | 1-to-many | OS04G57440 OS04G57490 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G01430 | 1 | |
| Tree-based ortholog | 1-to-many | OL02G01610 OL10G01190 OL07G01690 ... | 8 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00292G00220 PP00019G01570 PP00369G00210 | 3 | |
| Tree-based ortholog | 1-to-many | PP00315G00220 PP00052G00260 PP00199G00720 ... | 10 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT09G09810 | 1 | |
| Anchor point | many-to-many | PT14G02410 PT05G14160 PT07G04760 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G02410 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT14G02410 | 1 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI007G27170 | 1 | |
| Tree-based ortholog | 1-to-many | SI003G03270 SI003G03300 | 2 | ||
| Solanum lycopersicum | Anchor point | many-to-many | SL01G107760 SL02G093040 SL12G088670 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G088670 | 1 | ||
| Tree-based ortholog | 1-to-many | SL02G093040 SL03G044230 SL12G088670 ... | 4 | ||
| Sorghum bicolor | Anchor point | many-to-1 | SB02G038245 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G032320 | 1 | ||
| Tree-based ortholog | 1-to-many | SB06G032320 SB06G032360 | 2 | ||
| Vitis vinifera | Anchor point | many-to-many | VV07G04990 VV18G06730 VV03G00690 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G06730 | 1 | ||
| Tree-based ortholog | 1-to-many | VV18G06730 VV03G00690 VV07G04990 | 3 | ||
| Zea mays | Anchor point | many-to-1 | ZM10G14090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G02430 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM02G01020 ZM10G26120 | 2 |