Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00007G00060
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00007G00060 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | CP00007G00060 | 1 | ||
| Tree-based ortholog | CP00007G00050 CP00007G00060 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G28490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G28490 | 1 | ||
| Tree-based ortholog | many-to-1 | AT1G28490 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G61570 | 1 | |
| Tree-based ortholog | many-to-many | BD2G61570 BD4G24630 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G11170 | 1 | |
| Tree-based ortholog | many-to-1 | CR06G11170 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV124341G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV124341G00010 HV40603G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA06G18570 | 1 | |
| Tree-based ortholog | many-to-many | MA06G18570 MA10G09710 MA10G09700 ... | 4 | ||
| Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_01G69640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G69640 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_01G69640 OSINDICA_11G05350 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G73230 | 1 | |
| Tree-based ortholog | many-to-many | OS01G73230 OS11G06740 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL09G03780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G03780 | 1 | ||
| Tree-based ortholog | many-to-1 | OL09G03780 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00068G01160 PP00055G01010 | 2 | |
| Tree-based ortholog | many-to-many | PP00118G01220 PP00055G01010 PP00068G01160 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT04G05080 PT11G05970 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G05080 PT11G05970 | 2 | ||
| Tree-based ortholog | many-to-many | PT04G05080 PT11G05970 | 2 | ||
| Setaria italica | Orthologous gene family | 1-to-1 | SI005G47550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G47550 | 1 | ||
| Tree-based ortholog | many-to-many | SI005G47550 SI008G04570 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL12G089150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G089150 | 1 | ||
| Tree-based ortholog | many-to-1 | SL12G089150 | 1 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB03G046820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G046820 | 1 | ||
| Tree-based ortholog | many-to-many | SB03G046820 SB05G004120 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G13520 | 1 | |
| Tree-based ortholog | many-to-1 | VV05G13520 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G26440 ZM03G20340 | 2 | |
| Tree-based ortholog | many-to-many | ZM09G26440 ZM03G20340 | 2 |