Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00001G04110
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | CP00001G04110 | 1 |  |
| Tree-based ortholog | CP00001G04110 | 1 | ||
| Orthologous gene family | CP00001G04110 CP00081G01300 CP00081G01330 | 3 | ||
| Anchor point | CP00081G01280 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT2G29060 AT1G07530 | 2 | |
| Tree-based ortholog | 1-to-1 | AT2G37650 | 1 | ||
| Orthologous gene family | many-to-1 | AT1G07520 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD4G43680 | 1 | |
| Tree-based ortholog | 1-to-1 | BD4G43680 | 1 | ||
| Anchor point | 1-to-many | BD4G09155 BD2G54670 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV6313G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV6313G00010 | 1 | ||
| Orthologous gene family | many-to-many | HV126294G00010 HV159411G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA10G02450 | 1 | |
| Tree-based ortholog | 1-to-1 | MA05G08530 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G46700 | 1 | |
| Tree-based ortholog | 1-to-1 | OSINDICA_03G46700 | 1 | ||
| Orthologous gene family | many-to-many | OSINDICA_01G59130 OSINDICA_03G46700 OSINDICA_04G42240 ... | 4 | ||
| Anchor point | 1-to-many | OSINDICA_12G26460 OSINDICA_11G34220 OSINDICA_01G59130 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G48450 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G48450 | 1 | ||
| Anchor point | 1-to-many | OS11G47870 OS12G38490 OS01G62460 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00084G01460 PP00098G00120 PP00020G00390 | 3 | |
| Tree-based ortholog | 1-to-many | PP00098G00120 PP00084G01460 | 2 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G05740 | 1 | |
| Tree-based ortholog | 1-to-many | PT08G05740 PT10G20230 | 2 | ||
| Orthologous gene family | many-to-1 | PT09G03270 | 1 | ||
| Anchor point | 1-to-many | PT01G24170 PT06G08660 PT09G03270 ... | 5 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G46720 | 1 | |
| Tree-based ortholog | 1-to-1 | SI009G46720 | 1 | ||
| Orthologous gene family | many-to-many | SI003G06620 SI009G17870 SI009G17880 | 3 | ||
| Anchor point | 1-to-many | SI008G25330 SI005G38590 SI009G03080 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G053090 | 1 | |
| Tree-based ortholog | 1-to-1 | SL05G053090 | 1 | ||
| Orthologous gene family | many-to-1 | SL06G076280 | 1 | ||
| Anchor point | 1-to-many | SL06G076280 SL09G010920 SL04G011630 | 3 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G039510 | 1 | |
| Tree-based ortholog | 1-to-many | SB03G039510 SB08G018940 SB05G027830 ... | 21 | ||
| Orthologous gene family | many-to-1 | SB09G001140 | 1 | ||
| Anchor point | 1-to-1 | SB03G039510 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G05140 | 1 | |
| Tree-based ortholog | 1-to-many | VV13G05140 VV13G05110 VV13G05130 | 3 | ||
| Anchor point | 1-to-many | VV13G05140 VV06G03350 VV08G14430 | 3 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G23850 ZM01G11230 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G11230 ZM09G23850 | 2 | ||
| Orthologous gene family | many-to-many | ZM01G57970 ZM06G05150 ZM08G21530 | 3 | ||
| Anchor point | 1-to-1 | ZM01G11230 | 1 |